<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en">
<head>
<meta content="text/html; charset=US-ASCII" http-equiv="Content-Type">
<title>
GitLab
</title>



<style>img {
max-width: 100%; height: auto;
}
</style>
</head>
<body>
<div class="content">

<h3>
Étienne Mollier pushed to branch master
at <a href="https://salsa.debian.org/med-team/hyphy">Debian Med / hyphy</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/hyphy/-/commit/b3056a385a83dadfd2090734e3c623d757811946">b3056a38</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2022-02-11T13:22:11+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/hyphy/-/commit/5859d8f2e7928cf6015b341902e4b6ff500be008">5859d8f2</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2022-02-11T13:22:12+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.5.36+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/hyphy/-/commit/e4d1727cdc858b940ee45ec5f7af1df85cc02c49">e4d1727c</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2022-02-11T13:22:19+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/2.5.36+dfsg'

Update to upstream version '2.5.36+dfsg'
with Debian dir 174726c56f8b35851dbb2dc64eb18d243ca4dca1</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/hyphy/-/commit/a150fbcc1d2a7ce171df29f85203bbc4e7f41345">a150fbcc</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2022-02-11T13:33:30+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">d/hyphy-*.lintian-overrides: include typo line number.

This is necessary to match with the new format of the lintian
informational message.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/hyphy/-/commit/cdf1984eab53222846d882ea6158c759356b4b13">cdf1984e</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2022-02-11T13:38:19+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Ready to upload to unstable
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#dea01dd89a3b602828e630677fde5d77c06441c8">
<span class="new-file">
+
.travis.yml
</span>
</a>
</li>
<li class="file-stats">
<a href="#9a2aa4db38d3115ed60da621e012c0efc0172aae">
CMakeLists.txt
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#736c6bc0ca2ba9855b5819bfc4a7797bc0701807">
debian/hyphy-mpi.lintian-overrides
</a>
</li>
<li class="file-stats">
<a href="#f829438d138d5ed9c9570e7ec0589b81d1485bb8">
debian/hyphy-pt.lintian-overrides
</a>
</li>
<li class="file-stats">
<a href="#6e63fe65a52306764e614cf23abfc6b78d48078b">
res/TemplateBatchFiles/BGM.bf
</a>
</li>
<li class="file-stats">
<a href="#1fdf1a1dd435e31170c3db4d153f0c2f92c88581">
<span class="new-file">
+
res/TemplateBatchFiles/MSS-selector-2.bf
</span>
</a>
</li>
<li class="file-stats">
<a href="#0471440a9c90a004e27c37511b1f80d0cba41012">
<span class="new-file">
+
res/TemplateBatchFiles/MSS-selector.bf
</span>
</a>
</li>
<li class="file-stats">
<a href="#ee11fb76abbd6f170fe5db0bf69e163a13ded6ad">
res/TemplateBatchFiles/SM-2019.bf
</a>
</li>
<li class="file-stats">
<a href="#817efc81f1180519a6136b50a447433f20cf679d">
res/TemplateBatchFiles/SelectionAnalyses/FEL.bf
</a>
</li>
<li class="file-stats">
<a href="#cf5243a3058ebeab74574f8cd2c771cd63a43208">
res/TemplateBatchFiles/SelectionAnalyses/RELAX.bf
</a>
</li>
<li class="file-stats">
<a href="#43faaf1f56e02d91be5b281472029a32276f7b4c">
res/TemplateBatchFiles/SelectionAnalyses/aBSREL.bf
</a>
</li>
<li class="file-stats">
<a href="#c079be28c5231888d711d5c41d1be180223dfce6">
res/TemplateBatchFiles/SelectionAnalyses/modules/shared-load-file.bf
</a>
</li>
<li class="file-stats">
<a href="#7262b2343ebd8aaebd88c17a3764a06d5a4c0932">
res/TemplateBatchFiles/TemplateModels/chooseGeneticCode.def
</a>
</li>
<li class="file-stats">
<a href="#65ee9d47988109d0925fe3692b68b7b246e7fc1d">
res/TemplateBatchFiles/libv3/IOFunctions.bf
</a>
</li>
<li class="file-stats">
<a href="#c50a9ebb34fca832759d3d11698588f8851c99cb">
res/TemplateBatchFiles/libv3/UtilityFunctions.bf
</a>
</li>
<li class="file-stats">
<a href="#5dfec713e3892a936e8b5a63db56c03bee3ec252">
res/TemplateBatchFiles/libv3/all-terms.bf
</a>
</li>
<li class="file-stats">
<a href="#95a7c74b0e59bc9dc8d85b6ac4b02d308b4e09fb">
res/TemplateBatchFiles/libv3/models/codon/MG_REV.bf
</a>
</li>
<li class="file-stats">
<a href="#e8578acaed39aa42e302cfc6b43e09678d292e72">
res/TemplateBatchFiles/libv3/models/codon/MSS.bf
</a>
</li>
<li class="file-stats">
<a href="#a814a8f68cb26d458d0347113b00f184c37a1e1d">
res/TemplateBatchFiles/libv3/models/rate_variation.bf
</a>
</li>
<li class="file-stats">
<a href="#e7b72a8f9f424fe1e9e9e76f25522816189c14c9">
res/TemplateBatchFiles/libv3/tasks/alignments.bf
</a>
</li>
<li class="file-stats">
<a href="#c7933e171033f4eac9d83419583cca5474f9266c">
res/TemplateBatchFiles/libv3/tasks/estimators.bf
</a>
</li>
<li class="file-stats">
<a href="#3945e6db8feb0e4ed58719b69ff3d8485bc45e87">
res/TemplateBatchFiles/libv3/tasks/trees.bf
</a>
</li>
<li class="file-stats">
<a href="#02cbcb76e8ce1aa3e72d55e6696cda20813d57b6">
src/core/batchlan.cpp
</a>
</li>
<li class="file-stats">
<a href="#984635b15ce26c0824ba85946c002feb3137c030">
src/core/batchlan2.cpp
</a>
</li>
<li class="file-stats">
<a href="#cbedcf5fec686e5f563504b995c5d7d07fd8c6b2">
src/core/batchlanruntime.cpp
</a>
</li>
<li class="file-stats">
<a href="#7474aa77ff4fbb7ca8b12091ad6d5e459fdc18c6">
src/core/dataset.cpp
</a>
</li>
<li class="file-stats">
<a href="#a0fe81e4f5076dffb1bf945d1fc8f2b1bef8e630">
src/core/dataset_filter.cpp
</a>
</li>
<li class="file-stats">
<a href="#59d202cc6599be3167fc3bd731039997dcaf9c72">
src/core/fstring.cpp
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>

</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #666;">

<br>
<a href="https://salsa.debian.org/med-team/hyphy/-/compare/723d9eb927a404b4fb43e0a48a6e0ed5adec28c3...cdf1984eab53222846d882ea6158c759356b4b13">View it on GitLab</a>.
<br>
You're receiving this email because of your account on salsa.debian.org.
If you'd like to receive fewer emails, you can
adjust your notification settings.



</p>
</div>
</body>
</html>