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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/python-biopython">Debian Med / python-biopython</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/83201a536dcc6dc944bbb0acb025141f4de2db8b">83201a53</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-02-17T20:14:08+01:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Move w3-dtd-mathml from Suggests to Depends to avoid dangling symlink mathml2.dtd
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<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/c41a742cdca86a346914f4aa01a0ccd54864735d">c41a742c</a></strong>
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<span>by Andreas Tille</span>
<i>at 2022-02-17T20:15:03+01:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update renamed lintian tag names in lintian overrides.
Changes-By: lintian-brush
Fixes: lintian: renamed-tag
See-also: https://lintian.debian.org/tags/renamed-tag.html
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/cb984e7c8581549569639c2bed25cdac5057cc77">cb984e7c</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-02-17T20:32:36+01:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Add missing comma
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<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/ad70d27a8bf4d383a096c32390bced5b186f938d">ad70d27a</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-02-17T20:56:49+01:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
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<h4>3 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<a href="#4f54ae2ba427341e16fce8429f01ffdfa30a8314">
debian/python3-biopython.lintian-overrides
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<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/python-biopython/-/compare/676bb97a40d3752fa951980145c153fb989253db...ad70d27a8bf4d383a096c32390bced5b186f938d#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="mosel"><span class="n" style="color: #333;">python</span><span class="p">-</span><span class="n" style="color: #333;">biopython</span> <span class="p">(</span><span class="m" style="color: #099;">1.79</span><span class="p">+</span><span class="n" style="color: #333;">dfsg</span><span class="p">-</span><span class="m" style="color: #099;">2</span><span class="p">)</span> <span class="n" style="color: #333;">unstable</span><span class="p">;</span> <span class="n" style="color: #333;">urgency</span><span class="p">=</span><span class="n" style="color: #333;">medium</span></span>
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2
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="mosel"></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="mosel"> <span class="p">*</span> <span class="n" style="color: #333;">Move</span> <span class="n" style="color: #333;">w3</span><span class="p">-</span><span class="n" style="color: #333;">dtd</span><span class="p">-</span><span class="n" style="color: #333;">mathml</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">Suggests</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">Depends</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">avoid</span> <span class="n" style="color: #333;">dangling</span> <span class="n" style="color: #333;">symlink</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="mosel"> <span class="n" style="color: #333;">mathml2</span><span class="p">.</span><span class="n" style="color: #333;">dtd</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="mosel"></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="mosel"> <span class="p">--</span> <span class="n" style="color: #333;">Andreas</span> <span class="n" style="color: #333;">Tille</span> <span class="p"><</span><span class="n" style="color: #333;">tille</span><span class="p">@</span><span class="n" style="color: #333;">debian</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">></span> <span class="n" style="color: #333;">Thu</span><span class="p">,</span> <span class="m" style="color: #099;">17</span> <span class="n" style="color: #333;">Feb</span> <span class="m" style="color: #099;">2022</span> <span class="m" style="color: #099;">20</span><span class="p">:</span><span class="m" style="color: #099;">15</span><span class="p">:</span><span class="m" style="color: #099;">09</span> <span class="p">+</span><span class="m" style="color: #099;">0100</span></span>
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<td class="new_line diff-line-num new" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="mosel"></span>
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<td class="new_line diff-line-num" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="mosel"><span class="n" style="color: #333;">python</span><span class="p">-</span><span class="n" style="color: #333;">biopython</span> <span class="p">(</span><span class="m" style="color: #099;">1.79</span><span class="p">+</span><span class="n" style="color: #333;">dfsg</span><span class="p">-</span><span class="m" style="color: #099;">1</span><span class="p">)</span> <span class="n" style="color: #333;">unstable</span><span class="p">;</span> <span class="n" style="color: #333;">urgency</span><span class="p">=</span><span class="n" style="color: #333;">medium</span></span>
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2
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="mosel"></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="mosel"> <span class="p">*</span> <span class="n" style="color: #333;">Migrate</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">Experimental</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">Unstable</span><span class="p">.</span></span>
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<a href="https://salsa.debian.org/med-team/python-biopython/-/compare/676bb97a40d3752fa951980145c153fb989253db...ad70d27a8bf4d383a096c32390bced5b186f938d#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="59" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="59" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -59,7 +59,8 @@ Depends: ${python3:Depends},</td>
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<pre style="margin: 0;"> <span id="LC59" class="line" lang="plaintext"> ${shlibs:Depends},</span>
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<pre style="margin: 0;"> <span id="LC60" class="line" lang="plaintext"> ${misc:Depends},</span>
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<pre style="margin: 0;"> <span id="LC61" class="line" lang="plaintext"> python3-renderpm,</span>
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<pre style="margin: 0;">-<span id="LC62" class="line" lang="plaintext"> python3-reportlab</span>
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<pre style="margin: 0;">+<span id="LC62" class="line" lang="plaintext"> python3-reportlab,</span>
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<pre style="margin: 0;">+<span id="LC63" class="line" lang="plaintext"> w3-dtd-mathml</span>
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<pre style="margin: 0;"> <span id="LC64" class="line" lang="plaintext">Recommends: python-biopython-doc (= ${source:Version}),</span>
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<pre style="margin: 0;"> <span id="LC65" class="line" lang="plaintext"> ncbi-blast+ (>= 2.10.1-3)</span>
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<pre style="margin: 0;"> <span id="LC66" class="line" lang="plaintext">Suggests: python3-tk,</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="87" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -87,8 +88,7 @@ Suggests: python3-tk,</td>
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87
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88
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<pre style="margin: 0;"> <span id="LC88" class="line" lang="plaintext"> raxml,</span>
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<pre style="margin: 0;"> <span id="LC89" class="line" lang="plaintext"> samtools,</span>
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89
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<pre style="margin: 0;"> <span id="LC90" class="line" lang="plaintext"> t-coffee,</span>
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<pre style="margin: 0;">-<span id="LC90" class="line" lang="plaintext"> wise,</span>
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<pre style="margin: 0;">-<span id="LC91" class="line" lang="plaintext"> w3-dtd-mathml</span>
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<pre style="margin: 0;">+<span id="LC91" class="line" lang="plaintext"> wise</span>
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<pre style="margin: 0;"> <span id="LC92" class="line" lang="plaintext">Breaks: cnvkit (<< 0.9.7-1~),</span>
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<pre style="margin: 0;"> <span id="LC93" class="line" lang="plaintext"> ncbi-acc-download (<< 0.2.7-2~)</span>
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<pre style="margin: 0;"> <span id="LC94" class="line" lang="plaintext">Description: Python3 library for bioinformatics</span>
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<a href="https://salsa.debian.org/med-team/python-biopython/-/compare/676bb97a40d3752fa951980145c153fb989253db...ad70d27a8bf4d383a096c32390bced5b186f938d#4f54ae2ba427341e16fce8429f01ffdfa30a8314"><strong>debian/python3-biopython.lintian-overrides</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext"># This link has been introduced with the resolution of #672407 and might not</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"># be as much a concern as if it were an architecture dependent shared object.</span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext"><span class="idiff left right">breakout-link</span> usr/lib/python3/dist-packages/Bio/Entrez/DTDs/mathml2.dtd -> usr/share/xml/schema/w3c/mathml/dtd/mathml2.dtd</span></pre>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"><span class="idiff left right">ldconfig-escape</span> usr/lib/python3/dist-packages/Bio/Entrez/DTDs/mathml2.dtd -> usr/share/xml/schema/w3c/mathml/dtd/mathml2.dtd</span></pre>
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