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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/pbcopper">Debian Med / pbcopper</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/pbcopper/-/commit/ffdb345d88db31fbb1f4c7eaaac0acef7bdca252">ffdb345d</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-02-17T19:36:19+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.0.0+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/pbcopper/-/commit/e338e3cb2c998bfa8f0126c795167feb22b9f26e">e338e3cb</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-02-17T19:36:19+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/pbcopper/-/commit/8f06a71ef35c18d41fa94f453ce962183e538271">8f06a71e</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-02-17T19:36:22+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/2.0.0+dfsg'
Update to upstream version '2.0.0+dfsg'
with Debian dir c850722b90558ebbc425bc001bdd3efbda90d44b</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/pbcopper/-/commit/f17285eaf252bb75dd1fd7c4cd7dcf5ab424e019">f17285ea</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-02-17T19:40:37+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update patches
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/pbcopper/-/commit/2b334f45d78619028df622a994016253884ccdb5">2b334f45</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-02-17T20:06:18+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Follow upstream soname bump
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/pbcopper/-/commit/6ac8309c76dd0af1d66f57673d6ca722fd0a4f4a">6ac8309c</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-02-17T20:09:45+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">
.gitignore
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<li class="file-stats">
<a href="#ab09011fa121d0a2bb9fa4ca76094f2482b902b7">
CHANGELOG.md
</a>
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<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#5a2e006c89a4e191c66961c9a78e0bc34b07c9d4">
<span class="deleted-file">
−
debian/patches/boost_optional.patch
</span>
</a>
</li>
<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
</a>
</li>
<li class="file-stats">
<a href="#718e27e62a813171528221a199384946ec4875cc">
debian/patches/static+shared_lib.patch
</a>
</li>
<li class="file-stats">
<a href="#feedf4d0444f717d7227468a9529c2cf9740b6fd">
include/meson.build
</a>
</li>
<li class="file-stats">
<a href="#3fd521e5e8192258a1a5bcea2c50ce68776a175d">
<span class="new-file">
+
include/pbcopper/algorithm/Heteroduplex.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#b420bc61fccb763065b5254f457750333c839a77">
<span class="new-file">
+
include/pbcopper/algorithm/internal/HeteroduplexUtils.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#077601d3322ccb234f2a2b82028e38251b81d0d6">
include/pbcopper/align/AffineAlignment.h
</a>
</li>
<li class="file-stats">
<a href="#066fc990385a7afca17b3efc5d0eeeefe6a11ee9">
include/pbcopper/align/AlignConfig.h
</a>
</li>
<li class="file-stats">
<a href="#45265db1caaca84dc6a5c17d8d18f01bab9bc354">
include/pbcopper/align/BandedChainAlignment.h
</a>
</li>
<li class="file-stats">
<a href="#9cfb162d85920ee72a806051c3f94ffa54e5065f">
include/pbcopper/align/ChainSeeds.h
</a>
</li>
<li class="file-stats">
<a href="#c30c0c266bb235f6216b53578bc5b8eb37defd3b">
include/pbcopper/align/ChainSeedsConfig.h
</a>
</li>
<li class="file-stats">
<a href="#7f0a1d60228c9cd46fd38ff5edc38f5ef6f0ef85">
include/pbcopper/align/EdlibAlign.h
</a>
</li>
<li class="file-stats">
<a href="#81f1f0d1f703be19433f0283461c10e8ce242ca1">
include/pbcopper/align/FindSeeds.h
</a>
</li>
<li class="file-stats">
<a href="#6031bd2f422f0643bc528313380a6e58b0ca18df">
<span class="new-file">
+
include/pbcopper/align/GlobalLocalAlignment.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#c20d05b2a189927de80a713ab2b93b39751e3928">
include/pbcopper/align/LinearAlignment.h
</a>
</li>
<li class="file-stats">
<a href="#8fd2cf011e215800eb35878e76015fb58e13b558">
include/pbcopper/align/LocalAlignment.h
</a>
</li>
<li class="file-stats">
<a href="#047927381b7da1065051ebaa53f57071bf925958">
include/pbcopper/align/PairwiseAlignment.h
</a>
</li>
<li class="file-stats">
<a href="#c8e2cf893dda55202640e2bff874bd3337ae8a59">
include/pbcopper/align/Seed.h
</a>
</li>
<li class="file-stats">
<a href="#8229cffdcd459cb8f53ef3e78c89d4b13168908e">
include/pbcopper/align/Seeds.h
</a>
</li>
<li class="file-stats">
<a href="#31f01586be0ed07aecaeddeb9f68d40df8f34e57">
include/pbcopper/align/SparseAlignment.h
</a>
</li>
<li class="file-stats">
<a href="#d20504f465b6ca64b52a1f220c6101c6fd403a9c">
include/pbcopper/align/internal/BCAlignBlocks.h
</a>
</li>
<li class="file-stats">
<a href="#655757493d0b80cfce8f1d0713a2ff03e31921c7">
include/pbcopper/align/internal/BCAlignImpl.h
</a>
</li>
<li class="file-stats">
<a href="#d8361981afc8b251758a46e50060d9b5ec4b42a8">
include/pbcopper/cli2/CLI.h
</a>
</li>
<li class="file-stats">
<a href="#580a3ceb2ab230fb6af19cedd9a769adc74e8952">
include/pbcopper/cli2/Interface.h
</a>
</li>
<li class="file-stats">
<a href="#cbb57a8f2b1b9191cdc0a5aa457cbec23c271268">
include/pbcopper/cli2/MultiToolInterface.h
</a>
</li>
<li class="file-stats">
<a href="#6fd2cebca14442938e687779ca070a529a7c960c">
include/pbcopper/cli2/Option.h
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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