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<h3>
Nilesh Patra pushed to branch master
at <a href="https://salsa.debian.org/med-team/busco">Debian Med / busco</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/busco/-/commit/e8033ce1480bb33e7d2e16edcbe68a3e403ec5a7">e8033ce1</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2022-03-14T00:35:46+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 5.3.0</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/busco/-/commit/145d562ab0964dfd90a4acf27a37a7a955f41147">145d562a</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2022-03-14T00:35:49+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/5.3.0'
Update to upstream version '5.3.0'
with Debian dir 22e784336fdf26db6723dbb1267198715c217246</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/busco/-/commit/ad6038daa4be111fb0a875b6807b5e41d5309813">ad6038da</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2022-03-14T00:36:06+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Bump Standards-Version to 4.6.0 (no changes needed)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/busco/-/commit/5fc345576fa1d7f78eae9ebdbf5a888bb37edb87">5fc34557</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2022-03-14T00:36:57+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Refresh patches
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/busco/-/commit/70396107c9963af9000fa3b3faf8c23c5998067a">70396107</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2022-03-14T00:37:37+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#1c497fbb3a46b78edf04cc2a2fa33f67e3ffbe2a">
CHANGELOG
</a>
</li>
<li class="file-stats">
<a href="#0398ccd0f49298b10a3d76a47800d2ebecd49859">
LICENSE
</a>
</li>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#e8c92be72798d359b194a6dae2d7a90f61fe681a">
debian/patches/fix-and-disable-tests.patch
</a>
</li>
<li class="file-stats">
<a href="#d0258992426c6db3dfddea46b6a3778071bcad9a">
scripts/generate_plot.py
</a>
</li>
<li class="file-stats">
<a href="#8e2edce0d507e1297474f25c00cae94258db38d8">
setup.py
</a>
</li>
<li class="file-stats">
<a href="#de7754708bf8aa012a49a842a0d52b6628af3d59">
src/busco/AutoLineage.py
</a>
</li>
<li class="file-stats">
<a href="#e497bbf996017c0692c161d2cfed28374276cc73">
src/busco/BuscoConfig.py
</a>
</li>
<li class="file-stats">
<a href="#187e8b3b00a66c92055c44aac0cd5c916c6c913e">
src/busco/BuscoDownloadManager.py
</a>
</li>
<li class="file-stats">
<a href="#ea2771659c3ac27a7eedddf367d04f0deb13246b">
src/busco/BuscoLogger.py
</a>
</li>
<li class="file-stats">
<a href="#414e3994e90f7a52298faa998003b76c548435da">
src/busco/BuscoPlacer.py
</a>
</li>
<li class="file-stats">
<a href="#a8fd6f8fc327bd92758f2c1e85bd45f1bad18df0">
src/busco/BuscoRunner.py
</a>
</li>
<li class="file-stats">
<a href="#8a51b069da821add214ff0450e58d058e866eb0c">
src/busco/ConfigManager.py
</a>
</li>
<li class="file-stats">
<a href="#917b5408af6264ce2b46fc905eaf0095c9aa6bca">
src/busco/__init__.py
</a>
</li>
<li class="file-stats">
<a href="#ba1a56246dbcc4652eb6c8edd5d818e5b5c81d88">
src/busco/_version.py
</a>
</li>
<li class="file-stats">
<a href="#327451a27744b5461b22fe5b3c3f230fdae35ad7">
src/busco/analysis/Analysis.py
</a>
</li>
<li class="file-stats">
<a href="#cf0fa70998d90d794d0bbb251526f730829daf8b">
src/busco/analysis/BuscoAnalysis.py
</a>
</li>
<li class="file-stats">
<a href="#38e7c7424f4128a85c46ceb416b47ef2236e42b9">
src/busco/analysis/GeneSetAnalysis.py
</a>
</li>
<li class="file-stats">
<a href="#0750dd8caad8daa319bd078a0d80872708eb7fa7">
src/busco/analysis/GenomeAnalysis.py
</a>
</li>
<li class="file-stats">
<a href="#ebcdfbf3c61b5f1c742810606673eae398f762bc">
src/busco/analysis/TranscriptomeAnalysis.py
</a>
</li>
<li class="file-stats">
<a href="#9d54a8efc4f30849596104b53c7b5221e320b1c7">
src/busco/busco_tools/Toolset.py
</a>
</li>
<li class="file-stats">
<a href="#df66f82199021e386615cdfb8a774a29ed2f241b">
src/busco/busco_tools/augustus.py
</a>
</li>
<li class="file-stats">
<a href="#44a7a9c3d5eacdcf67af9565b069a28d0ef5092d">
src/busco/busco_tools/base.py
</a>
</li>
<li class="file-stats">
<a href="#ceda4baf9d2597a6f78ef5b8def54e0d9bcab618">
src/busco/busco_tools/blast.py
</a>
</li>
<li class="file-stats">
<a href="#a5f82d71f925534007d3cb3b900ad8be00859451">
src/busco/busco_tools/hmmer.py
</a>
</li>
<li class="file-stats">
<a href="#53f20ac1df6a610b6a21de977367ddb3704f3394">
src/busco/busco_tools/metaeuk.py
</a>
</li>
<li class="file-stats">
<a href="#a8bb1ce5dbb762d6d747877e3cd1a112432603a4">
src/busco/busco_tools/prodigal.py
</a>
</li>
<li class="file-stats">
<a href="#bd0e703ba072ee7447fcc5bd1e634475b3438cf9">
src/busco/run_BUSCO.py
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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<a href="https://salsa.debian.org/med-team/busco/-/compare/bb549f8b9ace242eb436dbb16532c811421456ff...70396107c9963af9000fa3b3faf8c23c5998067a">View it on GitLab</a>.
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