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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/flye">Debian Med / flye</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/flye/-/commit/33ce465b3451269c697b915c5ccf2d67c4fb505b">33ce465b</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-05-05T10:11:24+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fix watch file
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/flye/-/commit/604e71cc971b56842015ad26ebfa82c8bc4e01bb">604e71cc</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-05-05T10:12:22+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/flye/-/commit/4d268e567a619d668f3b915cca5d855232b72394">4d268e56</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-05-05T10:12:24+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.9+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/flye/-/commit/51094cd933e57729092d548feb1f8340d71c057a">51094cd9</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-05-05T10:12:50+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/2.9+dfsg'
Update to upstream version '2.9+dfsg'
with Debian dir 20b9d3d4253f7972bfb9add23d48c358726c492a</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/flye/-/commit/5ccdf6c3d1d3d64a7c290a6a764142769f4daad0">5ccdf6c3</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-05-05T10:12:50+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Standards-Version: 4.6.0
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/flye/-/commit/a2ce1378ce5482baa5abae9d31627ce538510802">a2ce1378</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-05-05T10:12:54+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Rules-Requires-Root: no
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/flye/-/commit/7b81e983d7619a5fb02f4dea1520af376b056aaa">7b81e983</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-05-05T10:13:12+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse.
Changes-By: lintian-brush
Fixes: lintian: upstream-metadata-missing-bug-tracking
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-bug-tracking.html
Fixes: lintian: upstream-metadata-missing-repository
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-repository.html
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/flye/-/commit/75f17498362c01b90b8b170b66ae498dc73da8fe">75f17498</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-05-05T10:28:18+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to new
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#8c77cc51b09ef1f7b294222180bcdb53ebb70e2f">
debian/tests/run-unit-test
</a>
</li>
<li class="file-stats">
<a href="#f5606a935d95a2f20059a7ac1136f47b2edadbf6">
debian/upstream/metadata
</a>
</li>
<li class="file-stats">
<a href="#68ef9f98c01c7eecd4c605cc26048a06f3304b79">
debian/watch
</a>
</li>
<li class="file-stats">
<a href="#7676bf80e0f15087674083b65af3b2447ab3d197">
docs/FAQ.md
</a>
</li>
<li class="file-stats">
<a href="#adf144f57098687d6b958a6143cce31566e93b81">
docs/INSTALL.md
</a>
</li>
<li class="file-stats">
<a href="#56fe2a53c1e2ac524f33a1db8ee6bf562e536dd7">
docs/NEWS.md
</a>
</li>
<li class="file-stats">
<a href="#d6b4130f82f26ccc3be36cf25ebf8d1530c00b6b">
docs/USAGE.md
</a>
</li>
<li class="file-stats">
<a href="#6919baf12fa5cd42b89f01656fe5338f8eb3b965">
flye/__build__.py
</a>
</li>
<li class="file-stats">
<a href="#6d1dc58311788e330e51514d6a1d5ee3176e5e2e">
flye/__version__.py
</a>
</li>
<li class="file-stats">
<a href="#388da2e9eb18d1e3403fbf95c283158ce8e79404">
flye/assembly/assemble.py
</a>
</li>
<li class="file-stats">
<a href="#4b27ab2b8a43c85b9e7519be69c49df3204f9f5b">
flye/assembly/repeat_graph.py
</a>
</li>
<li class="file-stats">
<a href="#21467d89dd693b4794f1289f348520f720b3061e">
flye/assembly/scaffolder.py
</a>
</li>
<li class="file-stats">
<a href="#c85fa245007d9b6301dc8710e657d971035f55d1">
flye/config/bin_cfg/asm_corrected_reads.cfg
</a>
</li>
<li class="file-stats">
<a href="#9961a8638d3e2bcbd0067f7c5f43408f2e0b7059">
flye/config/bin_cfg/asm_defaults.cfg
</a>
</li>
<li class="file-stats">
<a href="#87cff567fbb00399005895db69c617ef08e9046c">
flye/config/bin_cfg/asm_hifi.cfg
</a>
</li>
<li class="file-stats">
<a href="#e949c250dc93c2bda64b8dcd1654af48c89c73c0">
<span class="new-file">
+
flye/config/bin_cfg/asm_nano_hq.cfg
</span>
</a>
</li>
<li class="file-stats">
<a href="#8d8be1bf414dd46740a5270e55a75e9770070429">
flye/config/bin_cfg/asm_raw_reads.cfg
</a>
</li>
<li class="file-stats">
<a href="#239616042ec25bfbf8fcb3004fcd14c6680be87f">
flye/config/bin_cfg/asm_subasm.cfg
</a>
</li>
<li class="file-stats">
<a href="#e8ae8fb20b8f2fb9f3be052e3d315de1ab681d5c">
<span class="deleted-file">
−
flye/config/bin_cfg/nano_r7_homopolymers.mat
</span>
</a>
</li>
<li class="file-stats">
<a href="#2b0096ac41c301e4daeea2b2672bc56910599234">
<span class="deleted-file">
−
flye/config/bin_cfg/nano_r7_substitutions.mat
</span>
</a>
</li>
<li class="file-stats">
<a href="#77baa594f9fb282cfbe27880bf8f9df8d6a43b70">
<span class="new-file">
+
flye/config/bin_cfg/nano_r94_g36_homopolymers.mat
</span>
</a>
</li>
<li class="file-stats">
<a href="#ce40bf326274fb6137fc733673f4fe4aa4e0c64b">
<span class="new-file">
+
flye/config/bin_cfg/nano_r94_g36_substitutions.mat
</span>
</a>
</li>
<li class="file-stats">
<a href="#d8afef14880c3324f90e5088956b70d319ab0810">
<span class="new-file">
+
flye/config/bin_cfg/pacbio_chm13_homopolymers.mat
</span>
</a>
</li>
<li class="file-stats">
<a href="#88e38739a59c31713c9cb346b2ad934735f8c91b">
<span class="new-file">
+
flye/config/bin_cfg/pacbio_chm13_substitutions.mat
</span>
</a>
</li>
<li class="file-stats">
<a href="#229a7e891de4b2ebdf4de529d9ed799ce7b7de08">
flye/config/configurator.py
</a>
</li>
<li class="file-stats">
<a href="#e9ea77f43625d7b82872849bee0ade9d4783ef45">
flye/config/py_cfg.py
</a>
</li>
<li class="file-stats">
<a href="#04c3bbead23ec6359951eb6220f6e029640d5248">
flye/main.py
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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