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<h3>
Étienne Mollier pushed to branch master
at <a href="https://salsa.debian.org/med-team/phyml">Debian Med / phyml</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/phyml/-/commit/33834452298f542f49040956d5feec2bec74c7a5">33834452</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2022-05-08T16:02:01+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/phyml/-/commit/762d2370d796481ab7d38be642fde845b36ca7d2">762d2370</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2022-05-08T16:02:02+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 3.3.20220408</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/phyml/-/commit/69dec87e031e7d3308f7d4be2b77d45f368eb74d">69dec87e</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2022-05-08T16:02:07+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/3.3.20220408'
Update to upstream version '3.3.20220408'
with Debian dir 4f5d6f0cfcb569a07b7bea14e44b79abe84c93f0</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/phyml/-/commit/59f63fa014f9a70613ebef02d7aeee3938fbcc7f">59f63fa0</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2022-05-08T16:13:39+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Refresh no-configure-ac-date.patch.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/phyml/-/commit/a003c5b02cf7176015dcb170680da64481c271a9">a003c5b0</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2022-05-08T16:14:16+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Refresh fix_declaration_of_temp.patch.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/phyml/-/commit/bc7e4aa1bd0719d4e5eda820b8566cbac7003ebb">bc7e4aa1</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2022-05-08T16:14:49+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Refresh filter-sse3-intrinsics.patch.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/phyml/-/commit/834f0a098715b5b6af3e1088031da8baafa2b65c">834f0a09</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2022-05-08T16:16:34+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Refresh typos.patch.
</pre>
</li>
</ul>
<h4>25 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#87db583be5c13c1f7b3c958b10e03d67b6a2ca06">
configure.ac
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#f440d121a1e50460d9dd2fa5b3022d8246cca3ee">
debian/patches/filter-sse3-intrinsics.patch
</a>
</li>
<li class="file-stats">
<a href="#6f3a0e7c3e302714921e20148750add5ef227469">
debian/patches/fix_declaration_of_temp.patch
</a>
</li>
<li class="file-stats">
<a href="#e3a9dc24be73b1344c7407143138db68421c2439">
debian/patches/no-configure-ac-date.patch
</a>
</li>
<li class="file-stats">
<a href="#e0ece4a919b15a75c23178e379a8ca9c0870bb37">
debian/patches/typos.patch
</a>
</li>
<li class="file-stats">
<a href="#c043ea502a833cf5cddc83929dacade3d9189d39">
doc/phyml-manual.pdf
</a>
</li>
<li class="file-stats">
<a href="#7cd9138a88d69d2b408dde7d192d6e9970e49b20">
doc/phyml-manual.tex
</a>
</li>
<li class="file-stats">
<a href="#4fb38a1336439670432d1f1b82f98d12848e2a16">
src/cl.c
</a>
</li>
<li class="file-stats">
<a href="#5c82c16bfb5bf29e208d8d36dbcd80c456851fbb">
src/eigen.c
</a>
</li>
<li class="file-stats">
<a href="#66d9613e548af8a380fe8cc3e5e202e3d39715ae">
src/help.c
</a>
</li>
<li class="file-stats">
<a href="#433f644a73d0422079a0a1decf6a89581132b081">
src/init.c
</a>
</li>
<li class="file-stats">
<a href="#8415695980280a04294c9d52160ed22b4e5e1542">
src/interface.c
</a>
</li>
<li class="file-stats">
<a href="#0f3044ba93433ecc1c927c85984cb8dc55b76b9f">
src/io.c
</a>
</li>
<li class="file-stats">
<a href="#1808f655b869abcf8a1371c8ed1d35ef9b8a6a35">
src/location.c
</a>
</li>
<li class="file-stats">
<a href="#970ce0cf28ec6b9b27aeb3b6acbed343626e5cf2">
src/make.c
</a>
</li>
<li class="file-stats">
<a href="#f572146f3ca0da2730c9b94757227186c006291f">
src/mcmc.c
</a>
</li>
<li class="file-stats">
<a href="#1536fa120420b7c3d71787173aff9329f3204601">
src/mixt.c
</a>
</li>
<li class="file-stats">
<a href="#87589b531f9ad7089d334ec46b4c0fb9a84ca7c2">
src/models.c
</a>
</li>
<li class="file-stats">
<a href="#0a579f8e60b935ce1326c354a78830cd6e010047">
src/models.h
</a>
</li>
<li class="file-stats">
<a href="#c4d14f5364e759f1dd7740647982f8679523f36d">
src/optimiz.c
</a>
</li>
<li class="file-stats">
<a href="#9d708b565bae4a58912e1820ab013bbf6c075a1e">
src/optimiz.h
</a>
</li>
<li class="file-stats">
<a href="#cf6254bac2e8eec08c5b676bb531f2a9c0220fdb">
src/phyrex.c
</a>
</li>
<li class="file-stats">
<a href="#c6db944874d10613f0589b881511c02bf33e3e2e">
src/rates.c
</a>
</li>
<li class="file-stats">
<a href="#9e6042bf6bad4ddb707b2c00b409939947b5d378">
src/rates.h
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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