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<h3>
Étienne Mollier pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/hyphy">Debian Med / hyphy</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/hyphy/-/commit/9c72fc4cabab3a481e471c113ada4812bfb6b2ea">9c72fc4c</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2022-05-31T19:37:32+02:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.5.39+dfsg</pre>
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<h4>30 changed files:</h4>
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<a href="#9a2aa4db38d3115ed60da621e012c0efc0172aae">
CMakeLists.txt
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<a href="#6e63fe65a52306764e614cf23abfc6b78d48078b">
res/TemplateBatchFiles/BGM.bf
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<li class="file-stats">
<a href="#c772592437fe6a7d4e11445521dd00b76827f448">
res/TemplateBatchFiles/CleanStopCodons.bf
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<li class="file-stats">
<a href="#595b42362bc80e51259da598ac8ff2dd32cd7358">
res/TemplateBatchFiles/GARD.bf
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<a href="#4ed0809c2483f5150cdfd2c3bf07d212387406d0">
res/TemplateBatchFiles/SelectionAnalyses/BUSTED.bf
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<li class="file-stats">
<a href="#80cb7c212661a2afbd05c16dce9f84f45709578e">
res/TemplateBatchFiles/SelectionAnalyses/PRIME.bf
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<a href="#cf5243a3058ebeab74574f8cd2c771cd63a43208">
res/TemplateBatchFiles/SelectionAnalyses/RELAX.bf
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<a href="#c259485f7f96dc2ad350d5448508de915c6a9885">
res/TemplateBatchFiles/SelectionAnalyses/modules/io_functions.ibf
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<a href="#c079be28c5231888d711d5c41d1be180223dfce6">
res/TemplateBatchFiles/SelectionAnalyses/modules/shared-load-file.bf
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<a href="#65ee9d47988109d0925fe3692b68b7b246e7fc1d">
res/TemplateBatchFiles/libv3/IOFunctions.bf
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<a href="#c50a9ebb34fca832759d3d11698588f8851c99cb">
res/TemplateBatchFiles/libv3/UtilityFunctions.bf
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<a href="#801d4bca405dfccac3b1e451b211ca98bd00d599">
res/TemplateBatchFiles/libv3/models/parameters.bf
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<a href="#5c5226a707906d461dd112286b111fe4809fac66">
res/TemplateBatchFiles/libv3/tasks/ancestral.bf
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<a href="#c7933e171033f4eac9d83419583cca5474f9266c">
res/TemplateBatchFiles/libv3/tasks/estimators.bf
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<a href="#3945e6db8feb0e4ed58719b69ff3d8485bc45e87">
res/TemplateBatchFiles/libv3/tasks/trees.bf
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<li class="file-stats">
<a href="#9a5ae795d85e4d5f1568726c609e2499546cd590">
src/core/associative_list.cpp
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<li class="file-stats">
<a href="#2ce7329619b2284ff339ae9f79f84aabfca44b9e">
src/core/avllistx.cpp
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<a href="#02cbcb76e8ce1aa3e72d55e6696cda20813d57b6">
src/core/batchlan.cpp
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<li class="file-stats">
<a href="#984635b15ce26c0824ba85946c002feb3137c030">
src/core/batchlan2.cpp
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<li class="file-stats">
<a href="#cbedcf5fec686e5f563504b995c5d7d07fd8c6b2">
src/core/batchlanruntime.cpp
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<li class="file-stats">
<a href="#510613b42c8a7654f32b2e5cf38d6a8a88fad772">
src/core/calcnode.cpp
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<li class="file-stats">
<a href="#d09b45303442d6299978fa8d0c8f3338d6a17886">
src/core/formula.cpp
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<li class="file-stats">
<a href="#59d202cc6599be3167fc3bd731039997dcaf9c72">
src/core/fstring.cpp
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<a href="#07aceb8d215a75908cea626d9c80bc2a7c06639c">
src/core/global_things.cpp
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<li class="file-stats">
<a href="#76f0a93afbce847c38495f3c7d8f8124c3ea0d44">
src/core/include/associative_list.h
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<li class="file-stats">
<a href="#e21b6ac64470f896d4ceaeb549bd6c20ecb73d51">
src/core/include/baseobj.h
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<li class="file-stats">
<a href="#46380d67c22541ee76ad7fa2f39c30110df90a7c">
src/core/include/batchlan.h
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<li class="file-stats">
<a href="#aaa7ebd5e990cc6a7a01ea04c64dcf1f9e78e7a9">
src/core/include/calcnode.h
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<li class="file-stats">
<a href="#f096017b26d15cb3aebe7d7856046904f16536e5">
src/core/include/dataset_filter.h
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<li class="file-stats">
<a href="#40fc4f1e42852e6f2302e213cd9b3646abe98291">
src/core/include/formula.h
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<h5>The diff was not included because it is too large.</h5>
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