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<h3 style="margin-top: 20px; margin-bottom: 10px;">
Tomasz Buchert pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/mothur" style="color: #1068bf; text-decoration: none;">Debian Med / mothur</a>
</h3>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
</h4>
<ul>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/mothur/-/commit/980808ccf5fe69485267fc783c9ff60e64250de6" style="color: #1068bf; text-decoration: none;">980808cc</a></strong>
<div>
<span>by Tomasz Buchert</span>
<i>at 2021-03-27T11:43:26+01:00</i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>New upstream version 1.45.0</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/mothur/-/commit/10a09b2fa3ec249a244c62c1c332939ad3c1595e" style="color: #1068bf; text-decoration: none;">10a09b2f</a></strong>
<div>
<span>by Tomasz Buchert</span>
<i>at 2022-06-20T13:56:15+02:00</i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>New upstream version 1.48.0</pre>
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<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/mothur/-/commit/026a6d671271f9eed023e288271dea22687df6f0" style="color: #1068bf; text-decoration: none;">026a6d67</a></strong>
<div>
<span>by Tomasz Buchert</span>
<i>at 2022-06-20T14:24:03+02:00</i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Merge branch 'upstream' into tmp
</pre>
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<h4 style="margin-top: 10px; margin-bottom: 10px;">30 changed files:</h4>
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<li class="file-stats">
<a href="#21fa5596c2ccf7b6a79604a7e7d71acab8a9a2f1" style="color: #1068bf; text-decoration: none;">
CITATION.md
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<li class="file-stats">
<a href="#836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c" style="color: #1068bf; text-decoration: none;">
Makefile
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<li class="file-stats">
<a href="#8b67dc09b93b38e95da2a54036fa1db5b207cc5b" style="color: #1068bf; text-decoration: none;">
Mothur.xcodeproj/project.pbxproj
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<li class="file-stats">
<a href="#fc1b3bace89dd7d1ba88a340974edb0e8c817943" style="color: #1068bf; text-decoration: none;">
TestBatches/README
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<li class="file-stats">
<a href="#2fe7c047e00ce014cf046e138b724e3a1044247b" style="color: #1068bf; text-decoration: none;">
TestBatches/align.seqs/batch
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<li class="file-stats">
<a href="#9c332d2181693d4af85ff43a869121dc8b213509" style="color: #1068bf; text-decoration: none;">
TestBatches/classify.seqs/batch
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<li class="file-stats">
<a href="#4afb5b0820d006db9e22538b02cd4c014c720efe" style="color: #1068bf; text-decoration: none;">
TestBatches/make.contigs/batch
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<a href="#3f58f0bdd4736929491a8708187b27af632ab81e" style="color: #1068bf; text-decoration: none;">
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TestBatches/stability.batch
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<a href="#e6c828e7e51e11564f497a73c585aa61869f88ff" style="color: #1068bf; text-decoration: none;">
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TestBatches/stability.part2.batch
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<li class="file-stats">
<a href="#55df42ebbdfe42722f888b54a921036e0b83b007" style="color: #1068bf; text-decoration: none;">
<span class="new-file">
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TestBatches/translate.seqs/batch
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<li class="file-stats">
<a href="#0b398e4acb05d358b35c7b717891ce87ac6a53bd" style="color: #1068bf; text-decoration: none;">
Ubuntu_20_Build.txt
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<a href="#3b5389b41bae35f207850a8e95425fe4ba792259" style="color: #1068bf; text-decoration: none;">
makefile-internal
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<li class="file-stats">
<a href="#b6a443ca5a5ac19bc4788a8840cf312e8569c88e" style="color: #1068bf; text-decoration: none;">
source/alignreport.cpp
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<li class="file-stats">
<a href="#bb372f0c913f4b4604778de6af9b44ae81f60f40" style="color: #1068bf; text-decoration: none;">
source/alignreport.hpp
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<a href="#96fbd34c93a37c236dfcc26741e81b62e3ac89ed" style="color: #1068bf; text-decoration: none;">
source/calcsparcc.cpp
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<a href="#75a901c9e8f788e5e24e6b0d6ce2fc382548d0d1" style="color: #1068bf; text-decoration: none;">
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source/calculators/README.txt
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<a href="#cc02ccabb83842cbf73868a1dca19cd75f1c82a6" style="color: #1068bf; text-decoration: none;">
source/calculators/calculator.h
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<a href="#7fa68c77647ef3831dcce9288a3d060db6c9e0ef" style="color: #1068bf; text-decoration: none;">
source/calculators/diversitycalc.h
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<a href="#532ad27d948d65d09d7586a791710402022f1d7d" style="color: #1068bf; text-decoration: none;">
source/calculators/diversityutils.cpp
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<a href="#fce9a30fccd414c0aae8c6b88c394d67fa99f7b1" style="color: #1068bf; text-decoration: none;">
source/calculators/igrarefaction.cpp
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<a href="#f2334fff43e22255b485ff47f717f2321f0232d8" style="color: #1068bf; text-decoration: none;">
source/calculators/igrarefaction.hpp
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<a href="#2cce5f5a18c42cf040967e90a4a2be8add6e9e53" style="color: #1068bf; text-decoration: none;">
source/calculators/lnrarefaction.cpp
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<li class="file-stats">
<a href="#670f901f7a80fbbcaaf32d6be1c05e6895c96fd4" style="color: #1068bf; text-decoration: none;">
source/calculators/lsrarefaction.cpp
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<li class="file-stats">
<a href="#773c7c27f407079c6ef5e7a664b483629c72ffd6" style="color: #1068bf; text-decoration: none;">
source/calculators/mcc.hpp
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<li class="file-stats">
<a href="#640fe13dbe5a6f596968766abfc6525d2db2b72d" style="color: #1068bf; text-decoration: none;">
source/calculators/metroig.cpp
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<li class="file-stats">
<a href="#bc457426a3939af70cd80523a564554720ead8f7" style="color: #1068bf; text-decoration: none;">
source/calculators/metrolognormal.cpp
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<li class="file-stats">
<a href="#db616dde3488e35dd71a657204f7e1c801761ab7" style="color: #1068bf; text-decoration: none;">
source/calculators/metrolognormal.hpp
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<a href="#23daf82a71d901baa87a4d78adeb06369eb65470" style="color: #1068bf; text-decoration: none;">
source/calculators/metrologstudent.cpp
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<li class="file-stats">
<a href="#ddf54d9e7672907f549c93779300ac345a7482bf" style="color: #1068bf; text-decoration: none;">
source/calculators/metrologstudent.hpp
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<li class="file-stats">
<a href="#5e649198fc642e3a163c13202dc7518b9798fbea" style="color: #1068bf; text-decoration: none;">
source/calculators/metrosichel.cpp
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<h5 style="margin-top: 10px; margin-bottom: 10px; font-size: 0.875rem;">The diff was not included because it is too large.</h5>
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<p style="font-size: small; color: #666;">
—
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