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<h3 style="margin-top: 20px; margin-bottom: 10px;">
Étienne Mollier pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/augur" style="color: #1068bf; text-decoration: none;">Debian Med / augur</a>
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<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
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<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/augur/-/commit/4bd42a6bbd3dbac22b200fc3260da930bf889491" style="color: #1068bf; text-decoration: none;">4bd42a6b</a></strong>
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<span>by Étienne Mollier</span>
<i>at 2022-06-24T22:17:16+02:00</i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>New upstream version 16.0.1</pre>
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<h4 style="margin-top: 10px; margin-bottom: 10px;">30 changed files:</h4>
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<a href="#a91b1970808e533a5de67f93824231e12770a765" style="color: #1068bf; text-decoration: none;">
.github/workflows/ci.yaml
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<a href="#3679a14291455b741a3f8e4314b4280f29f3c0ff" style="color: #1068bf; text-decoration: none;">
.github/workflows/release.yaml
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<a href="#7facec255884dc55d3818e4dfbea89b1bdd7f49e" style="color: #1068bf; text-decoration: none;">
CHANGES.md
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<a href="#69f17ab31be5979667265a94a4d0ec2749588bd4" style="color: #1068bf; text-decoration: none;">
augur/__init__.py
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<a href="#a1a05fb3eb681edc11e8c987f65967f416af0ee1" style="color: #1068bf; text-decoration: none;">
augur/__version__.py
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<a href="#14308b7fa230cf03ef0c857a80b8aa21ffa2550b" style="color: #1068bf; text-decoration: none;">
augur/align.py
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<a href="#75dd11b179bed0c75a7e63134345d60a147c6525" style="color: #1068bf; text-decoration: none;">
augur/data/lat_longs.tsv
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<a href="#3ed70fb067595a65b1e4bf8038592dae0fd7e371" style="color: #1068bf; text-decoration: none;">
augur/data/schema-auspice-config-v2.json
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<li class="file-stats">
<a href="#fec638407816347df368936c41e5929f42fd4fe6" style="color: #1068bf; text-decoration: none;">
augur/data/schema-export-v2.json
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<a href="#28986205ec409da943f219e2c4a4f5738889d2b8" style="color: #1068bf; text-decoration: none;">
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augur/data/schema-measurements-collection-config.json
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<a href="#04217eb27db560e4b24906f711e0f5057658c818" style="color: #1068bf; text-decoration: none;">
augur/dates.py
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<a href="#09372111811ab2686408aecd14251ddb49550cbe" style="color: #1068bf; text-decoration: none;">
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augur/errors.py
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<a href="#30a665ea1e4ac79f38beb7b999ab740582bdd252" style="color: #1068bf; text-decoration: none;">
augur/export_v1.py
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<a href="#7051dc1354d6bc0d4b68367cda18a5846f82adb6" style="color: #1068bf; text-decoration: none;">
augur/export_v2.py
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<a href="#1058ed03848375e3c1a8b82623654cb578984455" style="color: #1068bf; text-decoration: none;">
augur/filter.py
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<a href="#6f472ebe2f0cdadd2929544cafb4b0e1fb8a0290" style="color: #1068bf; text-decoration: none;">
augur/frequencies.py
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<a href="#18618a0ff10132006e3f9aff6201bffa82f3d6a4" style="color: #1068bf; text-decoration: none;">
augur/index.py
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<a href="#2c0e8e80cc69382c40326b05bc7e76ca7fd787bb" style="color: #1068bf; text-decoration: none;">
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augur/io/__init__.py
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augur/io/file.py
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<a href="#c1e4d09f11261aac0c34eaba71163e546ad1741a" style="color: #1068bf; text-decoration: none;">
augur/io.py
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augur/io/metadata.py
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<a href="#b5c304dd7dbe6d2762a8de899dacc15e34eed109" style="color: #1068bf; text-decoration: none;">
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augur/io/print.py
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<a href="#1e0c40dea6abebd6cf56a7d41f95dc23503cbfff" style="color: #1068bf; text-decoration: none;">
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augur/io/sequences.py
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<a href="#94f155001fa249c55e22aa43e0d4173763e436bc" style="color: #1068bf; text-decoration: none;">
augur/util_support/shell_command_runner.py
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augur/io/shell_command_runner.py
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<a href="#a6b33a9a1ae8e0661621f972ead5549d742f00db" style="color: #1068bf; text-decoration: none;">
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augur/io/vcf.py
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<a href="#836b2c618045852f3c877dad8d3da014c642cafb" style="color: #1068bf; text-decoration: none;">
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augur/io_support/__init__.py
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<a href="#e692435be09f36b7d90dec26a0ba8545acc51e5c" style="color: #1068bf; text-decoration: none;">
augur/mask.py
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<a href="#f8709eb392790ec6f1e489a67b3956dfa8ab0353" style="color: #1068bf; text-decoration: none;">
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augur/measurements.py
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<a href="#51a81f540a747f2ec07de2c70e6445ae9b8e206c" style="color: #1068bf; text-decoration: none;">
augur/parse.py
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<li class="file-stats">
<a href="#104ddc27c2db78b040d33b5412a2de3d66f15177" style="color: #1068bf; text-decoration: none;">
augur/refine.py
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<li class="file-stats">
<a href="#8fe68be9db3907a4225b9cec4479db0ce65665e8" style="color: #1068bf; text-decoration: none;">
augur/titer_model.py
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<h5 style="margin-top: 10px; margin-bottom: 10px; font-size: 0.875rem;">The diff was not included because it is too large.</h5>
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