<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en">
<head>
<meta content="text/html; charset=US-ASCII" http-equiv="Content-Type">
<title>
GitLab
</title>



<style>img {
max-width: 100%; height: auto;
}
body {
font-size: 0.875rem;
}
body {
-webkit-text-shadow: rgba(255,255,255,0.01) 0 0 1px;
}
body {
font-family: -apple-system, BlinkMacSystemFont, "Segoe UI", Roboto, "Noto Sans", Ubuntu, Cantarell, "Helvetica Neue", sans-serif, "Apple Color Emoji", "Segoe UI Emoji", "Segoe UI Symbol", "Noto Color Emoji"; font-size: inherit;
}
</style>
</head>
<body style='font-size: inherit; -webkit-text-shadow: rgba(255,255,255,0.01) 0 0 1px; font-family: -apple-system, BlinkMacSystemFont, "Segoe UI", Roboto, "Noto Sans", Ubuntu, Cantarell, "Helvetica Neue", sans-serif, "Apple Color Emoji", "Segoe UI Emoji", "Segoe UI Symbol", "Noto Color Emoji";'>
<div class="content">

<h3 style="margin-top: 20px; margin-bottom: 10px;">
Andreas Tille pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/tiddit" style="color: #1068bf; text-decoration: none;">Debian Med / tiddit</a>
</h3>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
</h4>
<ul>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/tiddit/-/commit/15d04a76010615687bf49bf351e866b070520ea5" style="color: #1068bf; text-decoration: none;">15d04a76</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-07-26T09:44:27+02:00</i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>New upstream version 3.1.0+dfsg</pre>
</li>
</ul>
<h4 style="margin-top: 10px; margin-bottom: 10px;">30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d" style="color: #1068bf; text-decoration: none;">
README.md
</a>
</li>
<li class="file-stats">
<a href="#2ff2722d014ed036cd63fac102a8a8d03276bc4e" style="color: #1068bf; text-decoration: none;">
<span class="deleted-file">

TIDDIT.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#8e2edce0d507e1297474f25c00cae94258db38d8" style="color: #1068bf; text-decoration: none;">
<span class="new-file">
+
setup.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#b6c83ca2a4ea6b793cb00a89dd01be5a17651ec0" style="color: #1068bf; text-decoration: none;">
<span class="deleted-file">

src/TIDDIT.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#0eb83d3bb09da0f0f44274fc9c6d44af4c341470" style="color: #1068bf; text-decoration: none;">
<span class="deleted-file">

src/TIDDIT_calling.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#a7f6feec36e34dfb90c2cb7e6839db13d5541a78" style="color: #1068bf; text-decoration: none;">
<span class="deleted-file">

src/TIDDIT_coverage.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#09365b9df338450495d797ebb6f7e2fc0a9e9541" style="color: #1068bf; text-decoration: none;">
<span class="deleted-file">

src/TIDDIT_filtering.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#3525370e5dc3a7f5b555a23c6e125f5b97278df8" style="color: #1068bf; text-decoration: none;">
<span class="deleted-file">

src/TIDDIT_signals.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#742351309009b70e28c04c50b75d5287975926bb" style="color: #1068bf; text-decoration: none;">
<span class="deleted-file">

src/common.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#0c29ad81f3dcbd4669fad9c01d481beba84c85f0" style="color: #1068bf; text-decoration: none;">
<span class="deleted-file">

src/data_structures/CoverageModule.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#a23eaf38bfa4b7e8cd95192b19be0b738741763c" style="color: #1068bf; text-decoration: none;">
<span class="deleted-file">

src/data_structures/ProgramModules.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#7925ec9832a3ee540a369858d3a64fc3f124fffc" style="color: #1068bf; text-decoration: none;">
<span class="deleted-file">

src/data_structures/Translocation.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#123fb88bb817e4c4b2b6320d7e637c1261baab56" style="color: #1068bf; text-decoration: none;">
<span class="deleted-file">

src/data_structures/Translocation.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#ccc9bf43a6d9f6f2d79908f2e6aec2bd0ddcc87e" style="color: #1068bf; text-decoration: none;">
<span class="deleted-file">

src/data_structures/findTranslocationsOnTheFly.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#d84f26ee4b315b89f69f2b68d8f1a30c13c3593c" style="color: #1068bf; text-decoration: none;">
<span class="deleted-file">

src/errors/Data_Exception.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#4ef78144467ab361bd63642137d74b01bffdb53c" style="color: #1068bf; text-decoration: none;">
<span class="deleted-file">

src/errors/Data_Exception.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#83047bfb7c14689cfc1db2665d5653ae0a575cbc" style="color: #1068bf; text-decoration: none;">
<span class="deleted-file">

src/errors/Data_Not_Found.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#b1e155bde15a226320e5f315ad130a27134e201e" style="color: #1068bf; text-decoration: none;">
<span class="deleted-file">

src/errors/Data_Not_Found.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#a42d4f3ff70b957d68bb9a45b30fd0e112b45c10" style="color: #1068bf; text-decoration: none;">
<span class="deleted-file">

src/errors/File_Not_Found.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#f8906517b9e11f188e6bf7497d03314d1697ceee" style="color: #1068bf; text-decoration: none;">
<span class="deleted-file">

src/errors/File_Not_Found.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#4e2bf46678c01f495448bb90bb1fe3c3c9bc51e6" style="color: #1068bf; text-decoration: none;">
<span class="deleted-file">

src/errors/Generic_Exception.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#f1411d248efa3a75b25a84a8df66b41c9070d51e" style="color: #1068bf; text-decoration: none;">
<span class="deleted-file">

src/errors/Generic_Exception.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#8ebbcaa0fedf98dcfa40b176da0337b433a911c8" style="color: #1068bf; text-decoration: none;">
<span class="deleted-file">

src/errors/Incorrect_Format.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#a4d95607929c101c8a3efcf8132937c01826715d" style="color: #1068bf; text-decoration: none;">
<span class="deleted-file">

src/errors/Incorrect_Format.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#e11d8b1cacd08eafbd3b6221f30cd5635e1e52e2" style="color: #1068bf; text-decoration: none;">
<span class="deleted-file">

src/setup.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#73966c37b603d669dd39f9e42381e87a09c60652" style="color: #1068bf; text-decoration: none;">
src/DBSCAN.py

tiddit/DBSCAN.py
</a>
</li>
<li class="file-stats">
<a href="#50e743631ee24fd18b521a114ff3c5979f724e5e" style="color: #1068bf; text-decoration: none;">
<span class="new-file">
+
tiddit/__init__.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#a4d6d5acd8b63bc82a7ede7695daeb65269ebbf9" style="color: #1068bf; text-decoration: none;">
<span class="new-file">
+
tiddit/__main__.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#b8e0548d1ee3d872f60e8066825abdb509fd1456" style="color: #1068bf; text-decoration: none;">
<span class="new-file">
+
tiddit/tiddit_cluster.pyx
</span>
</a>
</li>
<li class="file-stats">
<a href="#8bea1b4d2c5f6a0bf2194093ffc49f8e2f7deb04" style="color: #1068bf; text-decoration: none;">
<span class="new-file">
+
tiddit/tiddit_contig_analysis.pyx
</span>
</a>
</li>
</ul>
<h5 style="margin-top: 10px; margin-bottom: 10px; font-size: 0.875rem;">The diff was not included because it is too large.</h5>

</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #666;">

<br>
<a href="https://salsa.debian.org/med-team/tiddit/-/commit/15d04a76010615687bf49bf351e866b070520ea5" style="color: #1068bf; text-decoration: none;">View it on GitLab</a>.
<br>
You're receiving this email because of your account on salsa.debian.org.
If you'd like to receive fewer emails, you can
adjust your notification settings.
<script type="application/ld+json">{"@context":"http://schema.org","@type":"EmailMessage","action":{"@type":"ViewAction","name":"View Commit","url":"https://salsa.debian.org/med-team/tiddit/-/commit/15d04a76010615687bf49bf351e866b070520ea5"}}</script>


</p>
</div>
</body>
</html>