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<h3 style="margin-top: 20px; margin-bottom: 10px;">
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/pbbam" style="color: #1068bf; text-decoration: none;">Debian Med / pbbam</a>
</h3>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
</h4>
<ul>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/pbbam/-/commit/842b1543223fa5644950ed5cc5fedef9e36113c3" style="color: #1068bf; text-decoration: none;">842b1543</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-07-29T11:28:33+02:00</i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>New upstream version 2.1.0+dfsg</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/pbbam/-/commit/cd4e696d7d1afebb55686af6d1b64974c799e009" style="color: #1068bf; text-decoration: none;">cd4e696d</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-07-29T11:28:33+02:00</i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>routine-update: New upstream version
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/pbbam/-/commit/be4df65bc0657148957b55718c5b52cc92c22daa" style="color: #1068bf; text-decoration: none;">be4df65b</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-07-29T11:28:36+02:00</i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Update upstream source from tag 'upstream/2.1.0+dfsg'
Update to upstream version '2.1.0+dfsg'
with Debian dir fc73d7dd3d9a324d636e6b34e3c063379a600593</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/pbbam/-/commit/748809de8298e12bc987849a1b944a5fdfeb2986" style="color: #1068bf; text-decoration: none;">748809de</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-07-29T11:28:36+02:00</i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>routine-update: Standards-Version: 4.6.1
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/pbbam/-/commit/df74c6c83c6ea9bfa484a6e37634d092797779b4" style="color: #1068bf; text-decoration: none;">df74c6c8</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-07-29T11:28:41+02:00</i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Drop unnecessary dependency on build-essential.
Changes-By: lintian-brush
Fixes: lintian: build-depends-on-build-essential
See-also: https://lintian.debian.org/tags/build-depends-on-build-essential.html
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/pbbam/-/commit/d2557368323c19657ee43f452a999f4af9e3d53e" style="color: #1068bf; text-decoration: none;">d2557368</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-07-29T11:29:57+02:00</i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Refresh patches
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/pbbam/-/commit/dd970ced2b3183a30656f640c8753b3493fadfd0" style="color: #1068bf; text-decoration: none;">dd970ced</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-07-29T11:36:42+02:00</i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Bump SONAME to 2.1.0
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/pbbam/-/commit/e2895a078a58feb282adde0df9851901aca28e4b" style="color: #1068bf; text-decoration: none;">e2895a07</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-07-29T11:40:40+02:00</i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Upload to unstable
</pre>
</li>
</ul>
<h4 style="margin-top: 10px; margin-bottom: 10px;">30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#01a718df87a96135eb956401504e555421dc5a3d" style="color: #1068bf; text-decoration: none;">
.clang-format
</a>
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<li class="file-stats">
<a href="#ab09011fa121d0a2bb9fa4ca76094f2482b902b7" style="color: #1068bf; text-decoration: none;">
CHANGELOG.md
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1" style="color: #1068bf; text-decoration: none;">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2" style="color: #1068bf; text-decoration: none;">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#c3e527b399f9d5adeeb200830b7dcac30c018fea" style="color: #1068bf; text-decoration: none;">
debian/patches/use_debian_packaged_python3-cram.patch
</a>
</li>
<li class="file-stats">
<a href="#faf15cd8173c62945898f63febc942899c5f24b6" style="color: #1068bf; text-decoration: none;">
docs/meson.build
</a>
</li>
<li class="file-stats">
<a href="#97939080c14fd57f90725f590b1094f8f0ee9f10" style="color: #1068bf; text-decoration: none;">
include/pbbam/BamRecord.h
</a>
</li>
<li class="file-stats">
<a href="#158e05e89acca4473ffa89f3fc109a051188ae4c" style="color: #1068bf; text-decoration: none;">
include/pbbam/BamRecordTag.h
</a>
</li>
<li class="file-stats">
<a href="#e05d4ab227d906896bf3f3542deee449cb8bf6b1" style="color: #1068bf; text-decoration: none;">
include/pbbam/Compare.h
</a>
</li>
<li class="file-stats">
<a href="#561409916a3666b2e0d3cda346902a5660f6ea6e" style="color: #1068bf; text-decoration: none;">
include/pbbam/DataSetXsd.h
</a>
</li>
<li class="file-stats">
<a href="#544c50f559d8fd1086dd99332602f43a62c3a486" style="color: #1068bf; text-decoration: none;">
include/pbbam/IndexedBamWriter.h
</a>
</li>
<li class="file-stats">
<a href="#c68ddb4d3d80f1bd78d18a5091b473151b16fdbb" style="color: #1068bf; text-decoration: none;">
include/pbbam/PbiFile.h
</a>
</li>
<li class="file-stats">
<a href="#80a51748ac8ee7298b3eaa8881107a810b196c97" style="color: #1068bf; text-decoration: none;">
include/pbbam/ReadGroupInfo.h
</a>
</li>
<li class="file-stats">
<a href="#37b413066fbaa80556fc8ecd2f02665279058fa6" style="color: #1068bf; text-decoration: none;">
include/pbbam/RecordType.h
</a>
</li>
<li class="file-stats">
<a href="#d626b6162eb6a32de44c39b81cf5b69c7c71c478" style="color: #1068bf; text-decoration: none;">
include/pbbam/SamWriter.h
</a>
</li>
<li class="file-stats">
<a href="#5b991d76e6deb387bd8a46cf7af0aa59a099bfb6" style="color: #1068bf; text-decoration: none;">
include/pbbam/ZmwGroupQuery.h
</a>
</li>
<li class="file-stats">
<a href="#42c15158d1864b8ea844daea98cf1e90704babbf" style="color: #1068bf; text-decoration: none;">
include/pbbam/exception/BundleChemistryMappingException.h
</a>
</li>
<li class="file-stats">
<a href="#d82ba2e956e31e3b63e1bdd98af138c0dde66688" style="color: #1068bf; text-decoration: none;">
include/pbbam/internal/DataSetElement.h
</a>
</li>
<li class="file-stats">
<a href="#0cc1139e3347f573ae1feee5b73dbc8a8a21fcfa" style="color: #1068bf; text-decoration: none;">
meson.build
</a>
</li>
<li class="file-stats">
<a href="#ca9bb7eff80503c97c83505e8acea4002fd87ac6" style="color: #1068bf; text-decoration: none;">
meson_options.txt
</a>
</li>
<li class="file-stats">
<a href="#861599125da29f8832a6d859d68520e8a40ca232" style="color: #1068bf; text-decoration: none;">
src/AlignmentPrinter.cpp
</a>
</li>
<li class="file-stats">
<a href="#22661e4cf590589988f769c04a2fea130dfc8c81" style="color: #1068bf; text-decoration: none;">
src/BaiIndexCache.cpp
</a>
</li>
<li class="file-stats">
<a href="#047ff0e446cd72e2dde6c3a8b3ea7568b7f2d9f0" style="color: #1068bf; text-decoration: none;">
src/BaiIndexedBamReader.cpp
</a>
</li>
<li class="file-stats">
<a href="#fc29b3f85aa313fa87a2684559a325393716bfdf" style="color: #1068bf; text-decoration: none;">
src/BamFile.cpp
</a>
</li>
<li class="file-stats">
<a href="#8833c1cb7e5471bf3817229b99775b6a332c73cd" style="color: #1068bf; text-decoration: none;">
src/BamReader.cpp
</a>
</li>
<li class="file-stats">
<a href="#56c231298674808f37ca982f80ec143740ef9671" style="color: #1068bf; text-decoration: none;">
src/BamRecord.cpp
</a>
</li>
<li class="file-stats">
<a href="#e25df7796c81913cbb8fe0630ebd05fc4fb81947" style="color: #1068bf; text-decoration: none;">
src/BamRecordTags.cpp
</a>
</li>
<li class="file-stats">
<a href="#0facdde6e947617ae8be6c99df1afab3a91e5128" style="color: #1068bf; text-decoration: none;">
src/BamRecordView.cpp
</a>
</li>
<li class="file-stats">
<a href="#95114a6fbde6b3ead1127d4494372d6a91f30cea" style="color: #1068bf; text-decoration: none;">
src/BamWriter.cpp
</a>
</li>
<li class="file-stats">
<a href="#f2cf518151841e9ba6a2fecc22268fa8d07d7a48" style="color: #1068bf; text-decoration: none;">
src/BgzipFastaWriter.cpp
</a>
</li>
</ul>
<h5 style="margin-top: 10px; margin-bottom: 10px; font-size: 0.875rem;">The diff was not included because it is too large.</h5>
</div>
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