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<div class="content">
<h3 style="margin-top: 20px; margin-bottom: 10px;">
Pierre Gruet pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/igv" style="color: #1068bf;">Debian Med / igv</a>
</h3>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
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<ul>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/igv/-/commit/21c3ad2ef4177d0099582d832c9eaab464a71375" style="color: #1068bf;">21c3ad2e</a></strong>
<div>
<span>by Pierre Gruet</span>
<i>at 2022-08-29T15:36:15+02:00</i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>New upstream version 2.14.0+dfsg</pre>
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<h4 style="margin-top: 10px; margin-bottom: 10px;">30 changed files:</h4>
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<li class="file-stats">
<a href="#26faf2a07a9e1acfeeda717bc1a5b409d726f22e" style="color: #1068bf;">
<span class="deleted-file">
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IGV.iml
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</li>
<li class="file-stats">
<a href="#f07866736216be0ee2aba49e392191aeae700a35" style="color: #1068bf;">
build.gradle
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<li class="file-stats">
<a href="#930ff9e732755d92ad4ffb21bc49b7e5e3e6ad46" style="color: #1068bf;">
license.txt
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<li class="file-stats">
<a href="#1fb8e2280c40ad3293a068ef80c5b248e732e942" style="color: #1068bf;">
scripts/nsis/license_win.txt
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<li class="file-stats">
<a href="#8fe47b4cf0a54cb6fd9ebc52c72790fc2ef4c9d2" style="color: #1068bf;">
scripts/test_suite.args
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<li class="file-stats">
<a href="#f10a22965c766b6225e4c1388dadfe3e1030fe39" style="color: #1068bf;">
src/main/java/org/broad/igv/Globals.java
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<li class="file-stats">
<a href="#f21a02492456af68e10747392c75b747fe8656ee" style="color: #1068bf;">
src/main/java/org/broad/igv/aws/S3LoadDialog.java
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<li class="file-stats">
<a href="#e444ebf686027724485bf3a775c6cf5007472045" style="color: #1068bf;">
src/main/java/org/broad/igv/batch/CommandExecutor.java
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<li class="file-stats">
<a href="#3a01485c702a4253b186c11a8e8432e6098f26d3" style="color: #1068bf;">
src/main/java/org/broad/igv/bbfile/BBDataSource.java
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<li class="file-stats">
<a href="#491f2b343da6312262d4f50dd17ea49dd4bc051b" style="color: #1068bf;">
src/main/java/org/broad/igv/bbfile/BBFileReader.java
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<li class="file-stats">
<a href="#1e17c836701e8ba27f078249c2aed5ed7a7532bc" style="color: #1068bf;">
src/main/java/org/broad/igv/bbfile/BedFeature.java
→
src/main/java/org/broad/igv/bbfile/BedData.java
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<li class="file-stats">
<a href="#02d5042b2ec40c70700025ccd014c90e5f6f11f3" style="color: #1068bf;">
src/main/java/org/broad/igv/bbfile/BigBedDataBlock.java
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</li>
<li class="file-stats">
<a href="#daf6a1e8b6300ace5dab596c4245cf365c14c5af" style="color: #1068bf;">
src/main/java/org/broad/igv/bbfile/BigBedIterator.java
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<li class="file-stats">
<a href="#0ed22943a67385843d51c6b1804b7922c7a1396f" style="color: #1068bf;">
src/main/java/org/broad/igv/bbfile/codecs/BBBedCodec.java
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<li class="file-stats">
<a href="#d9865d43e6b2498132950359687d020553e62c61" style="color: #1068bf;">
src/main/java/org/broad/igv/bbfile/codecs/BBCodec.java
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<li class="file-stats">
<a href="#ecaa31983fc5b2f8462b17d2a247e83b0493c89a" style="color: #1068bf;">
src/main/java/org/broad/igv/bbfile/codecs/BBCodecFactory.java
</a>
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<li class="file-stats">
<a href="#c7422da2673d5eb8f757380e3ab97647e7af6ef1" style="color: #1068bf;">
<span class="deleted-file">
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src/main/java/org/broad/igv/bbfile/codecs/BBGenePredCodec.java
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<a href="#1ada7810b33e59ab34997d66ace9b0787077e165" style="color: #1068bf;">
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src/main/java/org/broad/igv/bbfile/codecs/BBNarowPeakCodec.java
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<li class="file-stats">
<a href="#3f345e893aef01819892616511e1741989e3206b" style="color: #1068bf;">
<span class="new-file">
+
src/main/java/org/broad/igv/bbfile/codecs/BBRmskCodec.java
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<li class="file-stats">
<a href="#4fa7e6a9fa80783e181ca7eb76bc773e372468f4" style="color: #1068bf;">
src/main/java/org/broad/igv/feature/AbstractFeature.java
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<li class="file-stats">
<a href="#f69db8943227236b9cd61047ca2d04262df306b8" style="color: #1068bf;">
src/main/java/org/broad/igv/feature/AbstractFeatureParser.java
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<li class="file-stats">
<a href="#e6d85bc27a3b3cc7ce4513e762b923fcef1803d3" style="color: #1068bf;">
src/main/java/org/broad/igv/feature/BasicFeature.java
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<li class="file-stats">
<a href="#12e3bc80e1da78dbf200085b1dced0f4268b0282" style="color: #1068bf;">
<span class="deleted-file">
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src/main/java/org/broad/igv/feature/EncodePeakFeature.java
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<li class="file-stats">
<a href="#f79f04d124ce19beab58c680f311f604fe2c9c33" style="color: #1068bf;">
src/main/java/org/broad/igv/feature/FeatureDB.java
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<li class="file-stats">
<a href="#01274956c4cf92d9621a70e2a614c4933d96dca8" style="color: #1068bf;">
src/main/java/org/broad/igv/feature/GFFFeature.java
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<li class="file-stats">
<a href="#bcabbbd5f0a65df1657fc73b9aa7d8bed8b1ac20" style="color: #1068bf;">
src/main/java/org/broad/igv/feature/GFFParser.java
</a>
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<li class="file-stats">
<a href="#fc0db6069d4f73a026472a5b6c9f7b79af642131" style="color: #1068bf;">
src/main/java/org/broad/igv/feature/IGVFeature.java
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<li class="file-stats">
<a href="#5f4896f5fd83c1755e7ae5fc42a9ddbe97585397" style="color: #1068bf;">
src/main/java/org/broad/igv/feature/LocusScore.java
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<li class="file-stats">
<a href="#e9196110bc3184aedf852063f44f30ccc58d368f" style="color: #1068bf;">
src/main/java/org/broad/igv/feature/Mutation.java
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<li class="file-stats">
<a href="#728745893a6811c2916060c2665abcb6b13e9648" style="color: #1068bf;">
src/main/java/org/broad/igv/feature/NamedFeature.java
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</ul>
<h5 style="margin-top: 10px; margin-bottom: 10px; font-size: 0.875rem;">The diff was not included because it is too large.</h5>
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<p style="font-size: small; color: #666;">
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