<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en">
<head>
<meta content="text/html; charset=US-ASCII" http-equiv="Content-Type">
<title>
GitLab
</title>
<style data-premailer="ignore" type="text/css">
a { color: #1068bf; }
</style>
<style>img {
max-width: 100%; height: auto;
}
body {
font-size: 0.875rem;
}
body {
-webkit-text-shadow: rgba(255,255,255,0.01) 0 0 1px;
}
body {
font-family: -apple-system, BlinkMacSystemFont, "Segoe UI", Roboto, "Noto Sans", Ubuntu, Cantarell, "Helvetica Neue", sans-serif, "Apple Color Emoji", "Segoe UI Emoji", "Segoe UI Symbol", "Noto Color Emoji"; font-size: inherit;
}
</style>
</head>
<body style='font-size: inherit; -webkit-text-shadow: rgba(255,255,255,0.01) 0 0 1px; font-family: -apple-system, BlinkMacSystemFont, "Segoe UI", Roboto, "Noto Sans", Ubuntu, Cantarell, "Helvetica Neue", sans-serif, "Apple Color Emoji", "Segoe UI Emoji", "Segoe UI Symbol", "Noto Color Emoji";'>
<div class="content">
<h3 style="margin-top: 20px; margin-bottom: 10px;">
Andreas Tille pushed to branch master at <a href="https://salsa.debian.org/med-team/mmseqs2" style="color: #1068bf;">Debian Med / mmseqs2</a>
</h3>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
</h4>
<ul>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/mmseqs2/-/commit/77d65c035eced1105bf39da8ad170218aab1e12f" style="color: #1068bf;">77d65c03</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2022-11-24T12:37:58+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Fix watch file
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/mmseqs2/-/commit/c78314c32c3faffb42f1e1d64b0f355706515668" style="color: #1068bf;">c78314c3</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2022-11-24T12:38:33+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>routine-update: New upstream version
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/mmseqs2/-/commit/8f4450c10596d1a876ebb66468322e3745e0889d" style="color: #1068bf;">8f4450c1</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2022-11-24T12:38:34+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>New upstream version 14-7e284+ds</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/mmseqs2/-/commit/242fb592f815f2237a0b0982d8b67008f6ba6c9e" style="color: #1068bf;">242fb592</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2022-11-24T12:38:49+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Update upstream source from tag 'upstream/14-7e284+ds'
Update to upstream version '14-7e284+ds'
with Debian dir 50a2b5cf736982b6442b5440b0cb887665ddeaa7</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/mmseqs2/-/commit/6eaea526ea5b44c1e8e3df89838deafd65078d8a" style="color: #1068bf;">6eaea526</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2022-11-24T12:38:49+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>routine-update: Standards-Version: 4.6.1
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/mmseqs2/-/commit/0c5f29b006ca3de8180243ca72adb000a75a2236" style="color: #1068bf;">0c5f29b0</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2022-11-24T12:40:48+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Refresh patches
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/mmseqs2/-/commit/8b3a7afd6bbd5c9626a96ed47783aebb1787438f" style="color: #1068bf;">8b3a7afd</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2022-11-24T13:02:09+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>lintian-overrides (see lintian bug #1017966)
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/mmseqs2/-/commit/e2b2519b0773e04c477215176cd0401c20c09c4e" style="color: #1068bf;">e2b2519b</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2022-11-24T13:18:20+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Upload to unstable
</pre>
</li>
</ul>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
30 changed files:
</h4>
<ul>
<li class="file-stats">
<a href="#c7fe42138e1c33a6d76bbf9a03822d41e03da2cc" style="color: #1068bf;">
<span class="new-file">
+
.cirrus.yml
</span>
</a>
</li>
<li class="file-stats">
<a href="#05a721ebe3ba0754116825ed1359ff1785f4bbac" style="color: #1068bf;">
.dockerignore
</a>
</li>
<li class="file-stats">
<a href="#6a7d105cee155e00142e5ced05fbd9aa83f45b8b" style="color: #1068bf;">
<span class="new-file">
+
.github/workflows/docker.yml
</span>
</a>
</li>
<li class="file-stats">
<a href="#dea01dd89a3b602828e630677fde5d77c06441c8" style="color: #1068bf;">
<span class="deleted-file">
−
.travis.yml
</span>
</a>
</li>
<li class="file-stats">
<a href="#9a2aa4db38d3115ed60da621e012c0efc0172aae" style="color: #1068bf;">
CMakeLists.txt
</a>
</li>
<li class="file-stats">
<a href="#6651ddff6eb82c840ced7c1dddee15c6e1913dd4" style="color: #1068bf;">
Dockerfile
</a>
</li>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d" style="color: #1068bf;">
README.md
</a>
</li>
<li class="file-stats">
<a href="#40ebc6823f24f296c0cd3fddd6ccda69b74ff2e4" style="color: #1068bf;">
azure-pipelines.yml
</a>
</li>
<li class="file-stats">
<a href="#b0856d03cbccd90e97b5d5a796777c4293f8f054" style="color: #1068bf;">
data/resources/CMakeLists.txt
</a>
</li>
<li class="file-stats">
<a href="#ee1a8aa978121995b6ebd016e67b6584de01d51c" style="color: #1068bf;">
<span class="new-file">
+
data/resources/K4000.crf
</span>
</a>
</li>
<li class="file-stats">
<a href="#76d6f3ad7664848dec6db0ac2b890d046101fb08" style="color: #1068bf;">
data/workflow/CMakeLists.txt
</a>
</li>
<li class="file-stats">
<a href="#d74628ddde2e570a283b47e37c105120dcd0cd47" style="color: #1068bf;">
data/workflow/blastpgp.sh
</a>
</li>
<li class="file-stats">
<a href="#d3d522ac4a50917a3fea4e907c92ee38427773cb" style="color: #1068bf;">
data/workflow/databases.sh
</a>
</li>
<li class="file-stats">
<a href="#914d0f3a142c5f71c9b2e2f83c0cf2fcbf151a90" style="color: #1068bf;">
data/workflow/easysearch.sh
</a>
</li>
<li class="file-stats">
<a href="#1decdfdb95f4e52cd0e9b3b670a9239008e69b73" style="color: #1068bf;">
<span class="new-file">
+
data/workflow/iterativepp.sh
</span>
</a>
</li>
<li class="file-stats">
<a href="#c480d6991ed61647cb55b00e6458b133e344c19a" style="color: #1068bf;">
data/workflow/searchslicedtargetprofile.sh
</a>
</li>
<li class="file-stats">
<a href="#5c20cc17df860e286627a182010919fd6d99dedc" style="color: #1068bf;">
<span class="new-file">
+
data/workflow/tsv2exprofiledb.sh
</span>
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1" style="color: #1068bf;">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2" style="color: #1068bf;">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#5d4bc5bec9cccce49eb00b14a49d6fa0feedbf70" style="color: #1068bf;">
debian/patches/fix_tests.patch
</a>
</li>
<li class="file-stats">
<a href="#4d2d1dbfde0122105c73301fc1bd4fcb620a3554" style="color: #1068bf;">
debian/patches/use_system_gzstream.patch
</a>
</li>
<li class="file-stats">
<a href="#85ccdeeb03055211183e48520592d9a93592b330" style="color: #1068bf;">
<span class="new-file">
+
debian/source/lintian-overrides
</span>
</a>
</li>
<li class="file-stats">
<a href="#68ef9f98c01c7eecd4c605cc26048a06f3304b79" style="color: #1068bf;">
debian/watch
</a>
</li>
<li class="file-stats">
<a href="#8a3239b49b7563175ea5484f5495bb9e8eae77fd" style="color: #1068bf;">
lib/alp/sls_alp_data.cpp
</a>
</li>
<li class="file-stats">
<a href="#222a857590d289a92c566d08eb7e9dbb3a77c540" style="color: #1068bf;">
lib/alp/sls_alp_data.hpp
</a>
</li>
<li class="file-stats">
<a href="#17af25e9717f0768b840238459e1edfe2274b79d" style="color: #1068bf;">
lib/cacode/CMakeLists.txt
</a>
</li>
<li class="file-stats">
<a href="#389a362f86d5f722174cc775cb08e643658a6a20" style="color: #1068bf;">
lib/ksw2/kseq.h
</a>
</li>
<li class="file-stats">
<a href="#70c30ee1cfb0f9c764ef8311ce92e5b4f29082c2" style="color: #1068bf;">
lib/microtar/microtar.c
</a>
</li>
<li class="file-stats">
<a href="#45c8ee32ec3536a284ae6d72f8b9ef8c4779630f" style="color: #1068bf;">
lib/microtar/microtar.h
</a>
</li>
<li class="file-stats">
<a href="#5ba6b6dc2e79fcd60b2bd4ea9e83ac650a224acb" style="color: #1068bf;">
lib/nedmalloc/CMakeLists.txt
</a>
</li>
</ul>
<h5 style="margin-top: 10px; margin-bottom: 10px; font-size: 0.875rem;">
The diff was not included because it is too large.
</h5>
</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #666;">
—
<br>
<a href="https://salsa.debian.org/med-team/mmseqs2/-/compare/faae9ef0b7dc793ddefbdeedc82da95ee01bfd5c...e2b2519b0773e04c477215176cd0401c20c09c4e" style="color: #1068bf;">View it on GitLab</a>.
<br>
You're receiving this email because of your account on <a target="_blank" rel="noopener noreferrer" href="https://salsa.debian.org" style="color: #1068bf;">salsa.debian.org</a>. <a href="https://salsa.debian.org/-/profile/notifications" target="_blank" rel="noopener noreferrer" class="mng-notif-link" style="color: #1068bf;">Manage all notifications</a> · <a href="https://salsa.debian.org/help" target="_blank" rel="noopener noreferrer" class="help-link" style="color: #1068bf;">Help</a>
</p>
</div>
</body>
</html>