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<h3 style="margin-top: 20px; margin-bottom: 10px;">
Andreas Tille pushed to branch master at <a href="https://salsa.debian.org/med-team/metaphlan" style="color: #1068bf;">Debian Med / metaphlan2</a>
</h3>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
</h4>
<ul>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/metaphlan/-/commit/23aafff83deebecd45e26d73114fd2208fb18781" style="color: #1068bf;">23aafff8</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2022-11-24T12:27:05+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Fix watch file
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/metaphlan/-/commit/af1a77073fabe037831a513c4f3b7f03309b1c1f" style="color: #1068bf;">af1a7707</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2022-11-24T12:27:26+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>New upstream version 4.0.3</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/metaphlan/-/commit/a3e30c9ac6f91ddbdc42097debd37123a341559f" style="color: #1068bf;">a3e30c9a</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2022-11-24T12:27:26+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>routine-update: New upstream version
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/metaphlan/-/commit/0cc0213a29172a0875481eb8b20e6c1073712ec8" style="color: #1068bf;">0cc0213a</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2022-11-24T12:27:32+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Update upstream source from tag 'upstream/4.0.3'
Update to upstream version '4.0.3'
with Debian dir 651d7946ffc3abd970581cc72f60a91f7f0e9c53</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/metaphlan/-/commit/d2c084f6b4e47736cb1f2785bb5122fb63b80831" style="color: #1068bf;">d2c084f6</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2022-11-24T12:30:50+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Build-Depends: s/python3-all/python3/ since its a user application that should run sufficiently well with default Python3
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/metaphlan/-/commit/eb35742ed452b8c6096dc1ac85c9c5dab56f9b11" style="color: #1068bf;">eb35742e</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2022-11-24T12:36:22+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Upstream chngelog was renamed
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/metaphlan/-/commit/89e2788cf22925826e0ab436adef0e5405129dcf" style="color: #1068bf;">89e2788c</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2022-11-24T12:39:50+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>lintian-overrides for Rdata file
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/metaphlan/-/commit/11c6ede615d4d893fa4b7873ca94d08ebe9c756a" style="color: #1068bf;">11c6ede6</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2022-11-24T12:41:22+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Upload to unstable
</pre>
</li>
</ul>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
17 changed files:
</h4>
<ul>
<li class="file-stats">
<a href="#ab09011fa121d0a2bb9fa4ca76094f2482b902b7" style="color: #1068bf;">
changeset.txt
→
CHANGELOG.md
</a>
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<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d" style="color: #1068bf;">
README.md
</a>
</li>
<li class="file-stats">
<a href="#e501bff8b7897458db270d0d1d0eb257305c8221" style="color: #1068bf;">
bioconda_recipe/meta.yaml
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1" style="color: #1068bf;">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2" style="color: #1068bf;">
debian/control
</a>
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<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67" style="color: #1068bf;">
debian/rules
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<li class="file-stats">
<a href="#85ccdeeb03055211183e48520592d9a93592b330" style="color: #1068bf;">
<span class="new-file">
+
debian/source/lintian-overrides
</span>
</a>
</li>
<li class="file-stats">
<a href="#68ef9f98c01c7eecd4c605cc26048a06f3304b79" style="color: #1068bf;">
debian/watch
</a>
</li>
<li class="file-stats">
<a href="#f30bb90fec0a9215c31b092433cce3a89bca48d2" style="color: #1068bf;">
metaphlan/__init__.py
</a>
</li>
<li class="file-stats">
<a href="#7b846cc7b993e3bf9c89f934f3dc2fd2da05f7a3" style="color: #1068bf;">
metaphlan/metaphlan.py
</a>
</li>
<li class="file-stats">
<a href="#7aafae8111714ffa2e2a8985a5551b6f2b1540ce" style="color: #1068bf;">
metaphlan/strainphlan.py
</a>
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<li class="file-stats">
<a href="#c39ec4a818a7120cce35e8b0946a17bc65445240" style="color: #1068bf;">
<span class="new-file">
+
metaphlan/utils/VallesColomerM_2022_Jan21_thresholds.tsv
</span>
</a>
</li>
<li class="file-stats">
<a href="#1207307d3a46c087c4e4ec21b67391b4e5537b53" style="color: #1068bf;">
metaphlan/utils/__init__.py
</a>
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<li class="file-stats">
<a href="#a42b2b9ce9e26ba05088d341db73d2f7b24bf9ff" style="color: #1068bf;">
metaphlan/utils/add_metadata_tree.py
</a>
</li>
<li class="file-stats">
<a href="#b6b5a6ec098719c08119b2c215063e279e694af8" style="color: #1068bf;">
<span class="new-file">
+
metaphlan/utils/consensus_markers.py
</span>
</a>
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<li class="file-stats">
<a href="#edc35e320ed77b2d9cdf3902647177539a76ed98" style="color: #1068bf;">
<span class="new-file">
+
metaphlan/utils/database_controller.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#88d648f97455ad241b6c1301829e22a15b1c3668" style="color: #1068bf;">
metaphlan/utils/external_exec.py
</a>
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</ul>
<h5 style="margin-top: 10px; margin-bottom: 10px; font-size: 0.875rem;">
The diff was not included because it is too large.
</h5>
</div>
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