<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en">
<head>
<meta content="text/html; charset=US-ASCII" http-equiv="Content-Type">
<title>
GitLab
</title>
<style data-premailer="ignore" type="text/css">
a { color: #1068bf; }
</style>
<style>img {
max-width: 100%; height: auto;
}
body {
font-size: 0.875rem;
}
body {
-webkit-text-shadow: rgba(255,255,255,0.01) 0 0 1px;
}
body {
font-family: -apple-system, BlinkMacSystemFont, "Segoe UI", Roboto, "Noto Sans", Ubuntu, Cantarell, "Helvetica Neue", sans-serif, "Apple Color Emoji", "Segoe UI Emoji", "Segoe UI Symbol", "Noto Color Emoji"; font-size: inherit;
}
</style>
</head>
<body style='font-size: inherit; -webkit-text-shadow: rgba(255,255,255,0.01) 0 0 1px; font-family: -apple-system, BlinkMacSystemFont, "Segoe UI", Roboto, "Noto Sans", Ubuntu, Cantarell, "Helvetica Neue", sans-serif, "Apple Color Emoji", "Segoe UI Emoji", "Segoe UI Symbol", "Noto Color Emoji";'>
<div class="content">
<h3 style="margin-top: 20px; margin-bottom: 10px;">
Andreas Tille pushed to branch master at <a href="https://salsa.debian.org/med-team/snakemake" style="color: #1068bf;">Debian Med / snakemake</a>
</h3>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
</h4>
<ul>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/snakemake/-/commit/0a389e41f54cc9d1a8a33f5bc22f696e455f336c" style="color: #1068bf;">0a389e41</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2022-11-29T16:17:31+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Fix watch file
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/snakemake/-/commit/c6db3e7b9b3f96b7d1763cabfbb5f9d564cf64e8" style="color: #1068bf;">c6db3e7b</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2022-11-29T16:17:46+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>routine-update: New upstream version
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/snakemake/-/commit/ffe21d5422616de04c2d78c67ba8df236c718ac9" style="color: #1068bf;">ffe21d54</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2022-11-29T16:17:47+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>New upstream version 7.18.2</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/snakemake/-/commit/1fb519b1b38805a6fd15d4b3e303a8d5c5eddd41" style="color: #1068bf;">1fb519b1</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2022-11-29T16:18:07+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Update upstream source from tag 'upstream/7.18.2'
Update to upstream version '7.18.2'
with Debian dir 174ef2a446670ac92ed3666c9ee7920fa49ae2a3</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/snakemake/-/commit/c9938fae68c33847dba42097f24cdd3fab9d1b08" style="color: #1068bf;">c9938fae</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2022-11-29T16:18:24+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Apply multi-arch hints.
+ snakemake-doc: Add Multi-Arch: foreign.
Changes-By: apply-multiarch-hints
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/snakemake/-/commit/de5ba8b6ce5f5dfa30f4281255de1d286b45d1df" style="color: #1068bf;">de5ba8b6</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2022-11-29T16:29:16+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Refresh patches
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/snakemake/-/commit/165748c6d5984ba7b84a5ed9172b7c69a5f8ebde" style="color: #1068bf;">165748c6</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2022-11-29T17:36:45+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Add TODO
</pre>
</li>
</ul>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
30 changed files:
</h4>
<ul>
<li class="file-stats">
<a href="#fcc8b73a70c3f6bccb6382487e59d0069f657074" style="color: #1068bf;">
.github/workflows/conventional-prs.yml
</a>
</li>
<li class="file-stats">
<a href="#5c5ee4afb3fab2334411b3025d137240676c72c3" style="color: #1068bf;">
.github/workflows/docker-publish.yml
</a>
</li>
<li class="file-stats">
<a href="#c778226b6c4c0fb51cf7942c8ee1f3d9fc1249d0" style="color: #1068bf;">
.github/workflows/main.yml
</a>
</li>
<li class="file-stats">
<a href="#40aac2d0a8a09ef6a80810a34d290c86c19a709e" style="color: #1068bf;">
.github/workflows/release-please.yml
</a>
</li>
<li class="file-stats">
<a href="#41392f34e199f6eb3009583214aec66db7152a40" style="color: #1068bf;">
<span class="new-file">
+
.github/workflows/test-flux.yaml
</span>
</a>
</li>
<li class="file-stats">
<a href="#ab09011fa121d0a2bb9fa4ca76094f2482b902b7" style="color: #1068bf;">
CHANGELOG.md
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1" style="color: #1068bf;">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2" style="color: #1068bf;">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#135ec01bd10e1ae371b58cf95c485e05336f96b4" style="color: #1068bf;">
debian/patches/cirumvent-retry.patch
</a>
</li>
<li class="file-stats">
<a href="#28b0709ae4054bc48d823b79dcfc13f75eccbb7e" style="color: #1068bf;">
debian/patches/fix_test_pytest.patch
</a>
</li>
<li class="file-stats">
<a href="#c95b49fcdcf94cb632aec008933196e57cb26c3c" style="color: #1068bf;">
debian/patches/python2to3.patch
</a>
</li>
<li class="file-stats">
<a href="#e246f69e945a7c2e9a8e25cfacfcac7714c92b69" style="color: #1068bf;">
debian/patches/python3.patch
</a>
</li>
<li class="file-stats">
<a href="#aef4fc475d9c2698d0de9e80b3256895c791f41e" style="color: #1068bf;">
debian/patches/remove_ccbysa_snippets.patch
</a>
</li>
<li class="file-stats">
<a href="#87ba9cd7574dd1d01d72b7ceb5e99c2bc35089d1" style="color: #1068bf;">
debian/patches/reproducible-build.patch
</a>
</li>
<li class="file-stats">
<a href="#a4b0e78e8fe1547f2b9d33113b5e7108bcd2b4c6" style="color: #1068bf;">
debian/patches/skip-tests-with-internet.patch
</a>
</li>
<li class="file-stats">
<a href="#ff54e47f5e99b8693330287f0cde3307ea689e5d" style="color: #1068bf;">
debian/patches/test_from_any_directory.patch
</a>
</li>
<li class="file-stats">
<a href="#68ef9f98c01c7eecd4c605cc26048a06f3304b79" style="color: #1068bf;">
debian/watch
</a>
</li>
<li class="file-stats">
<a href="#aa070a9c9eb13bc0377eb60b4ef071df17152ac7" style="color: #1068bf;">
docs/executing/caching.rst
</a>
</li>
<li class="file-stats">
<a href="#5026e4863ea12b5792ff52f548d70284c3c1a181" style="color: #1068bf;">
docs/executing/cli.rst
</a>
</li>
<li class="file-stats">
<a href="#7e143b2e3a88fc7b437114c03b2302f5afa981ec" style="color: #1068bf;">
docs/executing/cloud.rst
</a>
</li>
<li class="file-stats">
<a href="#1b340500fb0201badf6b43c23e5fb2f9b0ebc252" style="color: #1068bf;">
<span class="new-file">
+
docs/executor_tutorial/flux.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#cd3fd8615ae98556916b352d1dff137ff81c4027" style="color: #1068bf;">
docs/executor_tutorial/tutorial.rst
</a>
</li>
<li class="file-stats">
<a href="#cc31921d407405d25ab3b66029cd6f032441fd24" style="color: #1068bf;">
docs/project_info/contributing.rst
</a>
</li>
<li class="file-stats">
<a href="#3c7246c0b371cfd3a475428be04706178ca01f0f" style="color: #1068bf;">
docs/project_info/faq.rst
</a>
</li>
<li class="file-stats">
<a href="#945ec74fc1c17902d98bca84b7a1f0dfd755c01b" style="color: #1068bf;">
docs/snakefiles/deployment.rst
</a>
</li>
<li class="file-stats">
<a href="#dfeb7b6e739ba66056c1799c63a5a39c7698b59f" style="color: #1068bf;">
docs/snakefiles/rules.rst
</a>
</li>
<li class="file-stats">
<a href="#6f0e88557663f7c802611536b868d357ec428260" style="color: #1068bf;">
docs/tutorial/tutorial.rst
</a>
</li>
<li class="file-stats">
<a href="#3a96a8195ab28f9af3f1676ab4f2d56e70394cf2" style="color: #1068bf;">
<span class="new-file">
+
examples/flux/Dockerfile
</span>
</a>
</li>
<li class="file-stats">
<a href="#3d53742940b6d580727a722b92129f56f4c2214d" style="color: #1068bf;">
<span class="new-file">
+
examples/flux/Snakefile
</span>
</a>
</li>
<li class="file-stats">
<a href="#c2acba86d5ef7b186a3f54c5fcbfeeb889e18738" style="color: #1068bf;">
misc/vim/syntax/snakemake.vim
</a>
</li>
</ul>
<h5 style="margin-top: 10px; margin-bottom: 10px; font-size: 0.875rem;">
The diff was not included because it is too large.
</h5>
</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #666;">
—
<br>
<a href="https://salsa.debian.org/med-team/snakemake/-/compare/6c88a5ce2f6f5cb1c6de10e57b8cbdc3dad30b0a...165748c6d5984ba7b84a5ed9172b7c69a5f8ebde" style="color: #1068bf;">View it on GitLab</a>.
<br>
You're receiving this email because of your account on <a target="_blank" rel="noopener noreferrer" href="https://salsa.debian.org" style="color: #1068bf;">salsa.debian.org</a>. <a href="https://salsa.debian.org/-/profile/notifications" target="_blank" rel="noopener noreferrer" class="mng-notif-link" style="color: #1068bf;">Manage all notifications</a> · <a href="https://salsa.debian.org/help" target="_blank" rel="noopener noreferrer" class="help-link" style="color: #1068bf;">Help</a>
</p>
</div>
</body>
</html>