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<h3 style="margin-top: 20px; margin-bottom: 10px;">
Michael R. Crusoe pushed to branch upstream at <a href="https://salsa.debian.org/med-team/toil">Debian Med / toil</a>
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<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
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<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/toil/-/commit/7a49767c44c8981230d534db27c2a83b8aa85be4">7a49767c</a></strong>
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<span> by Michael R. Crusoe </span> <i> at 2022-11-17T15:06:40+01:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>New upstream version 5.7.1</pre>
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30 changed files:
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<a href="#587d266bb27a4dc3022bbed44dfa19849df3044c">
.gitlab-ci.yml
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<a href="#836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c">
Makefile
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<a href="#ccd878cd594c7f4853c66e53a9d164a65e83fa2e">
attic/README.md
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<a href="#1a86abc3ec747473c3837236573ac86517bdc99e">
contrib/admin/cleanup_aws_resources.py
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<a href="#889c91308449c65c309146f6487ae74af64de5e9">
contrib/admin/mypy-with-ignore.py
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contrib/hooks/lib.py
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contrib/hooks/mypy-after-commit.py
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contrib/hooks/mypy-before-push.py
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contrib/pod-murder-bot/murder.yaml
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contrib/pod-murder-bot/podKiller.sh
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contrib/typeshed/dill/_dill.pyi
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<a href="#4f586be58f5e6019d9c8afff5db0546c7d1808de">
dashboard/grafana/toil_dashboard.json
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dashboard/mtail/Dockerfile
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docker/Dockerfile.py
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docker/singularity-sources.tsv
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docs/appendices/environment_vars.rst
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<a href="#abd8589b4d5ee2ea66ee95d8caf4e8759ffb9ce0">
docs/contributing/contributing.rst
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<a href="#9b7b19eaf87ceb524470a920a457425b602cd816">
docs/developingWorkflows/toilAPIBatchsystem.rst
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<a href="#32be2c2e3690a70b96e3263f2bb4aa0ce226602a">
docs/running/cliOptions.rst
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<a href="#9d336859ebc50ce12f946e32de94343f00be9ebb">
docs/running/cloud/clusterUtils.rst
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docs/running/server/Dockerfile
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<a href="#82be9fed605db0614e4f7450c4fdf3ff4a3b8c3e">
docs/running/server/docker-compose.yml
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<a href="#c5d7964ea3686ec9493493d76844305b3f84baab">
docs/running/server/wes.rst
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<a href="#94ef85ac03a9b3926d1726c51aaf7e720200965d">
requirements-aws.txt
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<a href="#b1f2507748c66f157346e017893778f0bef7bab0">
requirements-cwl.txt
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requirements-dev.txt
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requirements-google.txt
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<a href="#8f82779feb90c0fb03a473c5e041127d75b7becd">
requirements-server.txt
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<a href="#8c91c0296909b5ea3c496fde69e9dc44a6c6ae5f">
setup.cfg
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<a href="#8e2edce0d507e1297474f25c00cae94258db38d8">
setup.py
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<h5 style="margin-top: 10px; margin-bottom: 10px; font-size: 0.875rem;">
The diff was not included because it is too large.
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