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<h3 style="margin-top: 20px; margin-bottom: 10px;">
Andreas Tille pushed to branch upstream at <a href="https://salsa.debian.org/med-team/pbcopper">Debian Med / pbcopper</a>
</h3>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
</h4>
<ul>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/pbcopper/-/commit/506b63c06c86b3cf9107459476d733058662bc67">506b63c0</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-01-19T14:00:14+01:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>New upstream version 2.2.0+dfsg</pre>
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<h4 style="margin-top: 10px; margin-bottom: 10px;">
30 changed files:
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<a href="#01a718df87a96135eb956401504e555421dc5a3d">
.clang-format
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<li class="file-stats">
<a href="#ab09011fa121d0a2bb9fa4ca76094f2482b902b7">
CHANGELOG.md
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<li class="file-stats">
<a href="#feedf4d0444f717d7227468a9529c2cf9740b6fd">
include/meson.build
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<li class="file-stats">
<a href="#06d5752151db8a61365b4b492732bb08fb61f036">
include/pbcopper/PbcopperConfig.h
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<li class="file-stats">
<a href="#3fd521e5e8192258a1a5bcea2c50ce68776a175d">
include/pbcopper/algorithm/Heteroduplex.h
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<li class="file-stats">
<a href="#6037ff27690131d60794b54c9146ba5f34377128">
<span class="new-file">
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include/pbcopper/algorithm/KMerIndex.h
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<a href="#7e0cf74250f44e75462958d5f44a34371a09b343">
<span class="new-file">
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include/pbcopper/algorithm/LSHIndex.h
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<li class="file-stats">
<a href="#dcc650fcd36734222ecb5e8ec10154eff7417758">
src/align/cssw/ssw.h

include/pbcopper/align/cssw/ssw.h
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<li class="file-stats">
<a href="#d11e28fd9ffa84c8ac328bfaa78716d3bf441bd6">
src/align/cssw/ssw_cpp.h

include/pbcopper/align/cssw/ssw_cpp.h
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<li class="file-stats">
<a href="#d20504f465b6ca64b52a1f220c6101c6fd403a9c">
include/pbcopper/align/internal/BCAlignBlocks.h
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<li class="file-stats">
<a href="#580a3ceb2ab230fb6af19cedd9a769adc74e8952">
include/pbcopper/cli2/Interface.h
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<li class="file-stats">
<a href="#0c262e0c86517315a3273ef801ca8e414109020a">
include/pbcopper/cli2/OptionValue.h
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<a href="#3f8844a999662eed136c8e2d19330e7eaf4a70d2">
include/pbcopper/cli2/internal/HelpMetrics.h
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<li class="file-stats">
<a href="#fff1885f9914ba7fbb095a5481c2e52b26574989">
include/pbcopper/cli2/internal/InterfaceData.h
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<a href="#83a5c82435cdcb770db9b1998766644d8dc3f9c9">
include/pbcopper/cli2/internal/MultiToolInterfaceData.h
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<a href="#8cf6692c4ba7540c24802abb8bcecc95e74121e9">
include/pbcopper/cli2/internal/OptionData.h
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<li class="file-stats">
<a href="#7405c913a70d82c9f79a902fd4ab6def163f1312">
include/pbcopper/cli2/internal/PositionalArgumentData.h
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<li class="file-stats">
<a href="#22b13b9dc9172eadfa53b6f175fb337b5196f889">
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include/pbcopper/container/BitContainer.h
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<li class="file-stats">
<a href="#6349b7ffe8c35bb2a5762688e55b3a4ec3453e8a">
<span class="new-file">
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include/pbcopper/container/BitConversion.h
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<a href="#e36d64154555eac145c70d8e0a828949aaafd388">
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include/pbcopper/container/BitmaskContainer.h
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<li class="file-stats">
<a href="#ccf4767888cfb47852c36e0ce4475c31058c8571">
<span class="new-file">
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include/pbcopper/container/CapacityPointer.h
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<li class="file-stats">
<a href="#7bdf002fe540cfe4a2618e6ff745c4eba9013993">
<span class="new-file">
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include/pbcopper/container/Contains.h
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<a href="#a140b13dda80b14a947dae16c980d12ec852d817">
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include/pbcopper/container/DNAString.h
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<a href="#db78f5378a57ba72c0291dc89d5771f1ca73fd9d">
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include/pbcopper/container/RHUnordered.h
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<a href="#1f67fd99028039f10a60622be93cf036236b61d4">
<span class="new-file">
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include/pbcopper/container/Unordered.h
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<li class="file-stats">
<a href="#00907d2ed115f5ddd4517153b7d2433af92e1d75">
<span class="new-file">
+
include/pbcopper/cuda/AsciiConversion.h
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<li class="file-stats">
<a href="#4e0b4e30f3a3f161e723ddcc806847ea575c074f">
<span class="new-file">
+
include/pbcopper/cuda/Cuda.h
</span>
</a>
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<li class="file-stats">
<a href="#7f03be3653ff76843a43460d03ab84f93a603ebe">
include/pbcopper/data/CCSTag.h
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</li>
<li class="file-stats">
<a href="#65a3ebe149a1894adb090e490cec8ccb443a7c4c">
include/pbcopper/data/Cigar.h
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<li class="file-stats">
<a href="#1d3500e8ffe408b7a4ed8c66446854e1c472c097">
include/pbcopper/data/CigarOperation.h
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<h5 style="margin-top: 10px; margin-bottom: 10px; font-size: 0.875rem;">
The diff was not included because it is too large.
</h5>

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