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<div class="content">
<h3 style="margin-top: 20px; margin-bottom: 10px;">
Aaron M. Ucko pushed to branch master at <a href="https://salsa.debian.org/med-team/sra-sdk">Debian Med / sra-sdk</a>
</h3>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
</h4>
<ul>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/sra-sdk/-/commit/1400bb4874c6d99fd44f200e4ce5c7bc5e24fac8">1400bb48</a></strong>
<div>
<span> by Aaron M. Ucko </span> <i> at 2022-12-27T12:30:32-05:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>New upstream version 3.0.2+dfsg</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/sra-sdk/-/commit/27090bec2cf3a7827167728669774f6aa737766c">27090bec</a></strong>
<div>
<span> by Aaron M. Ucko </span> <i> at 2022-12-27T15:21:05-05:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Merge tag 'upstream/3.0.2+dfsg'
Upstream version 3.0.2(+dfsg).
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/sra-sdk/-/commit/8fa7e4f18c6b877e01b14ec426981bb152d9b753">8fa7e4f1</a></strong>
<div>
<span> by Aaron M. Ucko </span> <i> at 2023-01-15T20:38:17-05:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>New upstream version 3.0.3+dfsg</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/sra-sdk/-/commit/a7dcc0e719579fea598a263edd83a30b2927c9d0">a7dcc0e7</a></strong>
<div>
<span> by Aaron M. Ucko </span> <i> at 2023-01-15T20:41:21-05:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Merge tag 'upstream/3.0.3+dfsg'
Upstream version 3.0.3(+dfsg).
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/sra-sdk/-/commit/52dee6ae3239afeb2f55fede2b2956430edd2006">52dee6ae</a></strong>
<div>
<span> by Aaron M. Ucko </span> <i> at 2023-01-15T20:56:15-05:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>debian/patches: Update for 3.0.3 (3.0.1+, really).
In particular, account for layout changes and better support for using
system libraries.
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/sra-sdk/-/commit/6ca5347a20a56cc7912bf9ac3eedbd85a07b676f">6ca5347a</a></strong>
<div>
<span> by Aaron M. Ucko </span> <i> at 2023-01-15T21:56:40-05:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>d/rules: Correctly accommodate multiple supported Python versions.
I'd insufficiently adapted ncbi-ngs's relevant logic.
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/sra-sdk/-/commit/d3f15196621bdbfa5c04188a81aa7a67463cfa35">d3f15196</a></strong>
<div>
<span> by Aaron M. Ucko </span> <i> at 2023-01-18T21:47:52-05:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>d/rules: Account for layout changes and CMAKE_INSTALL_LIBDIR support
... with the latter yielding multiarch paths.
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/sra-sdk/-/commit/679ca4bec0d11cb161d315e1cd0845d69b696d3a">679ca4be</a></strong>
<div>
<span> by Aaron M. Ucko </span> <i> at 2023-01-18T21:48:18-05:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>debian/{control,salsa-ci.yml}: Build against libncbi-vdb-dev 3.0.1+.
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/sra-sdk/-/commit/4be6d16015c85857024d0a531ab730aa9e2be435">4be6d160</a></strong>
<div>
<span> by Aaron M. Ucko </span> <i> at 2023-01-18T21:48:18-05:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>debian/copyright: Update for 3.0.3 (3.0.1+, really).
Account for layout changes as of 3.0.1 and drop references to content
removed upstream, both in Files-Excluded and in special cases.
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/sra-sdk/-/commit/32f271b0a8ca78c9e71672664c8c029649bfc413">32f271b0</a></strong>
<div>
<span> by Aaron M. Ucko </span> <i> at 2023-01-18T21:48:19-05:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>.gitignore: Unhardcode architecture name in build tree (obj-*).
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/sra-sdk/-/commit/fab5f2571ec3af9eaccf909698c37c6ed09c79b0">fab5f257</a></strong>
<div>
<span> by Aaron M. Ucko </span> <i> at 2023-01-18T21:48:19-05:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Ignore build results under ngs/ngs-python (dist, ngs.egg-info).
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/sra-sdk/-/commit/2107510cdae93ab6fe55277e64ddeb8d0418763a">2107510c</a></strong>
<div>
<span> by Aaron M. Ucko </span> <i> at 2023-01-18T21:48:30-05:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>debian/rules: Clean up newly generated files under ngs/ngs-python.
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/sra-sdk/-/commit/473e766214dc917eb8b6cbb378ed9283f65d25f3">473e7662</a></strong>
<div>
<span> by Aaron M. Ucko </span> <i> at 2023-01-18T21:48:32-05:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>debian/{rules,sra-toolkit.install}: +/usr/lib/sra-toolkit (#1025278)
Move sratools and *-orig to a new /usr/lib/sra-toolkit directory;
repoint symlinks accordingly.
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/sra-sdk/-/commit/4752653e27a3c4a3ede331b6a8aae3dde1dbc815">4752653e</a></strong>
<div>
<span> by Aaron M. Ucko </span> <i> at 2023-01-18T21:48:32-05:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>routine-update: Standards-Version: 4.6.2
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/sra-sdk/-/commit/d0f29526aa51a0d4949349d5f8f8c8c31a361af2">d0f29526</a></strong>
<div>
<span> by Aaron M. Ucko </span> <i> at 2023-01-18T21:48:32-05:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Finalize sra-sdk 3.0.3+dfsg-1, still targeting experimental
(necessarily, until ncbi-vdb 3 hits unstable).
</pre>
</li>
</ul>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
25 changed files:
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.gitignore
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CHANGES.md
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README.md
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The diff was not included because it is too large.
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