<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en">
<head>
<meta content="text/html; charset=US-ASCII" http-equiv="Content-Type">
<title>
GitLab
</title>

<style data-premailer="ignore" type="text/css">
a { color: #1068bf; }
</style>


<style>img {
max-width: 100%; height: auto;
}
body {
font-size: 0.875rem;
}
body {
-webkit-text-shadow: rgba(255,255,255,0.01) 0 0 1px;
}
body {
font-family: -apple-system, BlinkMacSystemFont, "Segoe UI", Roboto, "Noto Sans", Ubuntu, Cantarell, "Helvetica Neue", sans-serif, "Apple Color Emoji", "Segoe UI Emoji", "Segoe UI Symbol", "Noto Color Emoji"; font-size: inherit;
}
</style>
</head>
<body style='font-size: inherit; -webkit-text-shadow: rgba(255,255,255,0.01) 0 0 1px; font-family: -apple-system, BlinkMacSystemFont, "Segoe UI", Roboto, "Noto Sans", Ubuntu, Cantarell, "Helvetica Neue", sans-serif, "Apple Color Emoji", "Segoe UI Emoji", "Segoe UI Symbol", "Noto Color Emoji";'>
<div class="content">

<h3 style="margin-top: 20px; margin-bottom: 10px;">
Andreas Tille pushed to branch master at <a href="https://salsa.debian.org/med-team/partitionfinder">Debian Med / partitionfinder</a>
</h3>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
</h4>
<ul>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/partitionfinder/-/commit/fac235333cb29f5416ae4e237777a3e74e677d23">fac23533</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-01-27T17:45:48+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>New upstream version 2.1.1+dfsg</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/partitionfinder/-/commit/c65d9451c0fccc3ff0c3a74e01612dba86c2f664">c65d9451</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-01-27T17:45:48+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>routine-update: New upstream version
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/partitionfinder/-/commit/82ac70a41809e5b950d0bada9ccdb644b0c02ff9">82ac70a4</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-01-27T17:45:50+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Update upstream source from tag 'upstream/2.1.1+dfsg'

Update to upstream version '2.1.1+dfsg'
with Debian dir 89fe715ad4e227ca329449d1e679e3b3102d77e5</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/partitionfinder/-/commit/e7e83ecf1f3f30f128adc88ca628d71aad971bd6">e7e83ecf</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-01-27T17:45:50+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>routine-update: Standards-Version: 4.6.2
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/partitionfinder/-/commit/e672595ef4e4eeec4172485f22c3ef5dca06761c">e672595e</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-01-27T17:45:50+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>routine-update: debhelper-compat 13
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/partitionfinder/-/commit/da07f10743ed107b44bf0bccb96b664cc5d164ab">da07f107</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-01-27T17:45:55+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>routine-update: Add salsa-ci file
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/partitionfinder/-/commit/bee092b5a70d5eb6d9a30ec0325e3dc2875f37f4">bee092b5</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-01-27T17:45:55+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>routine-update: Rules-Requires-Root: no
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/partitionfinder/-/commit/81734098645c3d1c4445bd1acfb44d8c21cb555f">81734098</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-01-27T17:46:01+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Set upstream metadata fields: Bug-Database, Bug-Submit, Repository-Browse.

Changes-By: lintian-brush
Fixes: lintian: upstream-metadata-file-is-missing
See-also: https://lintian.debian.org/tags/upstream-metadata-file-is-missing.html
Fixes: lintian: upstream-metadata-missing-bug-tracking
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-bug-tracking.html
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/partitionfinder/-/commit/9a9e1528f9900be9b8eba80874824932fb376514">9a9e1528</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-01-27T17:47:17+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>routine-update: watch file standard 4
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/partitionfinder/-/commit/e3908fa59b7ef42efcc1050fb0b1613be7e9ea31">e3908fa5</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-01-27T17:55:53+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Refresh patch
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/partitionfinder/-/commit/b161d736a0abeca89c128e90d1cdfd1ddf8c9a6c">b161d736</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-01-27T17:57:50+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Package has probably never hit new
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/partitionfinder/-/commit/5f077e9163acce114c8ab470b55e29d1151fe5d1">5f077e91</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-01-27T17:59:15+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Modernise packaging.  Code remains Python2 thus not hunting this down further
</pre>
</li>
</ul>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
30 changed files:
</h4>
<ul>
<li class="file-stats">
<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">
.gitignore
</a>
</li>
<li class="file-stats">
<a href="#0398ccd0f49298b10a3d76a47800d2ebecd49859">
<span class="new-file">
+
LICENSE
</span>
</a>
</li>
<li class="file-stats">
<a href="#836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c">
<span class="new-file">
+
Makefile
</span>
</a>
</li>
<li class="file-stats">
<a href="#a54ff7b816f7e7f16af0f3c4544784d9943af47a">
PartitionFinder.py
</a>
</li>
<li class="file-stats">
<a href="#03122502a8879c37398bcf454549c5b1c7135006">
<span class="new-file">
+
PartitionFinderMorphology.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#de43a7ddf84b6e4aa29e9c74328666f34397e7d0">
PartitionFinderProtein.py
</a>
</li>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
</li>
<li class="file-stats">
<a href="#b4526a8ecf11e8a539a9bac9ad0465799de16b65">
<span class="deleted-file">

all_tests.sh
</span>
</a>
</li>
<li class="file-stats">
<a href="#a5270040b6c79bfccd4798387b26d88cd152b467">
build_ext.py
</a>
</li>
<li class="file-stats">
<a href="#3b78428c3ab805b21b16eb2d319460fc5f0c8618">
<span class="deleted-file">

build_programs.sh
</span>
</a>
</li>
<li class="file-stats">
<a href="#28b5b5af407d812d1854c34560fc40fe1727a674">
clean_tests.sh
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4">
<span class="deleted-file">

debian/compat
</span>
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#17dbcea3fdaf31e66c40ff1a6bb08a8cf539373f">
debian/patches/0001-Fix-raxml-path-locate-binaries-under-usr-bin.patch
</a>
</li>
<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
</a>
</li>
<li class="file-stats">
<a href="#b1dbf22e88351ec0d5d1d1a7f53295504b480e61">
<span class="new-file">
+
debian/salsa-ci.yml
</span>
</a>
</li>
<li class="file-stats">
<a href="#f5606a935d95a2f20059a7ac1136f47b2edadbf6">
<span class="new-file">
+
debian/upstream/metadata
</span>
</a>
</li>
<li class="file-stats">
<a href="#68ef9f98c01c7eecd4c605cc26048a06f3304b79">
debian/watch
</a>
</li>
<li class="file-stats">
<a href="#65d2e5216cf4ea44871a26f8bc8a8b39ba7bd815">
<span class="deleted-file">

docs/Figure1.pptx
</span>
</a>
</li>
<li class="file-stats">
<a href="#2e5bb7c69d8b14abf70706878ac66e555a539c0b">
<span class="deleted-file">

docs/Manual_v1.0.0.pdf
</span>
</a>
</li>
<li class="file-stats">
<a href="#a214908f1c19c1ac43681dfb0ef12d1b66d75bb5">
<span class="deleted-file">

docs/Manual_v1.0.1.pdf
</span>
</a>
</li>
<li class="file-stats">
<a href="#c3a1de8aa458157d1e963e0e7952fb6828cf06c0">
<span class="deleted-file">

docs/Manual_v1.1.1.pdf
</span>
</a>
</li>
<li class="file-stats">
<a href="#041975cfe08e94d90e0c94d42fb30a127035e3e6">
docs/Manual_v2.0.0.docx

docs/Manual_v2.1.x.docx
</a>
</li>
<li class="file-stats">
<a href="#6641b3b0cb1345540751a717ac53979d91dff56e">
docs/Manual_v2.0.0.pdf

docs/Manual_v2.1.x.pdf
</a>
</li>
<li class="file-stats">
<a href="#12cd96387844808ff702a1523184ef2b4834f3fc">
<span class="deleted-file">

docs/PartitionFinder_Manual_v1.0.1.docx
</span>
</a>
</li>
<li class="file-stats">
<a href="#0b365e959f92378d5bcc4accc167640c4f7cc086">
<span class="deleted-file">

docs/PartitionFinder_Manual_v1.1.0.docx
</span>
</a>
</li>
<li class="file-stats">
<a href="#9f7cbce127b94a94ee14460050fbff2ce58417d0">
<span class="deleted-file">

docs/README.md
</span>
</a>
</li>
<li class="file-stats">
<a href="#54870af69f10a46090e664f2a97c88698a4df84d">
docs/citationsplot.pdf
</a>
</li>
<li class="file-stats">
<a href="#226a2073b81d1af12455892664782101fa1f39ec">
docs/citationsplot2.pdf
</a>
</li>
</ul>
<h5 style="margin-top: 10px; margin-bottom: 10px; font-size: 0.875rem;">
The diff was not included because it is too large.
</h5>

</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #666;">

<br>
<a href="https://salsa.debian.org/med-team/partitionfinder/-/compare/45a2bacb575b08e981e752038a55fae0543d11cf...5f077e9163acce114c8ab470b55e29d1151fe5d1">View it on GitLab</a>.
<br>
You're receiving this email because of your account on <a target="_blank" rel="noopener noreferrer" href="https://salsa.debian.org">salsa.debian.org</a>. <a href="https://salsa.debian.org/-/profile/notifications" target="_blank" rel="noopener noreferrer" class="mng-notif-link">Manage all notifications</a> · <a href="https://salsa.debian.org/help" target="_blank" rel="noopener noreferrer" class="help-link">Help</a>



</p>
</div>
</body>
</html>