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<h3 style="margin-top: 20px; margin-bottom: 10px;">
Rebecca N. Palmer pushed to branch main at <a href="https://salsa.debian.org/med-team/snakemake">Debian Med / snakemake</a>
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<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
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<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/snakemake/-/commit/7a37afdaf241d8ce936cd78bdf9b60a44e1bb8ee">7a37afda</a></strong>
<div>
<span> by Rebecca N. Palmer </span> <i> at 2023-02-01T21:45:59+00:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>New upstream version 7.20.0</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/snakemake/-/commit/6fe401634c5591a426c1c509b59443687a862083">6fe40163</a></strong>
<div>
<span> by Rebecca N. Palmer </span> <i> at 2023-02-01T21:46:24+00:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Update upstream source from tag 'upstream/7.20.0'
Update to upstream version '7.20.0'
with Debian dir b016a2acf937ce08d901f9e754c6d263ff6cddf1</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/snakemake/-/commit/40dd5c453ab303dced16e128ada332fb62ebfbe0">40dd5c45</a></strong>
<div>
<span> by Rebecca N. Palmer </span> <i> at 2023-02-01T22:13:19+00:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>Refresh patches, update copyright
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<h4 style="margin-top: 10px; margin-bottom: 10px;">
30 changed files:
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<a href="#5c5ee4afb3fab2334411b3025d137240676c72c3">
.github/workflows/docker-publish.yml
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<a href="#c778226b6c4c0fb51cf7942c8ee1f3d9fc1249d0">
.github/workflows/main.yml
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<a href="#40aac2d0a8a09ef6a80810a34d290c86c19a709e">
.github/workflows/release-please.yml
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<a href="#ab09011fa121d0a2bb9fa4ca76094f2482b902b7">
CHANGELOG.md
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<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<a href="#adb7f75f79e3bb85eb62912a2904c5d24af878fb">
debian/copyright
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<a href="#9a1d15e694f16dad7c25d39b40a3fbc27764a816">
debian/patches/0003-Compat-fix.patch
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<a href="#6cbb5336bfa272ad2629f5ab1fabba4240e2114e">
debian/patches/0008-remove_sphinx.ext.patch
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<a href="#135ec01bd10e1ae371b58cf95c485e05336f96b4">
debian/patches/cirumvent-retry.patch
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<a href="#28b0709ae4054bc48d823b79dcfc13f75eccbb7e">
debian/patches/fix_test_pytest.patch
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<a href="#3a60a3d8ad77c5d7b9f50f6d9e07887ec385a803">
debian/patches/local_javascript.patch
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<a href="#c95b49fcdcf94cb632aec008933196e57cb26c3c">
debian/patches/python2to3.patch
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<a href="#e246f69e945a7c2e9a8e25cfacfcac7714c92b69">
debian/patches/python3.patch
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<a href="#8f735a93bb087196e4fdf34f28d1de6782e8d849">
debian/patches/remove-yte.patch
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<a href="#87ba9cd7574dd1d01d72b7ceb5e99c2bc35089d1">
debian/patches/reproducible-build.patch
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<a href="#ff54e47f5e99b8693330287f0cde3307ea689e5d">
debian/patches/test_from_any_directory.patch
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<a href="#260fb267aa59c740952b443e87e306a192a8d82e">
debian/patches/workaround_sphinx_issue.patch
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<a href="#5026e4863ea12b5792ff52f548d70284c3c1a181">
docs/executing/cli.rst
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<a href="#7e143b2e3a88fc7b437114c03b2302f5afa981ec">
docs/executing/cloud.rst
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<li class="file-stats">
<a href="#945ec74fc1c17902d98bca84b7a1f0dfd755c01b">
docs/snakefiles/deployment.rst
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<a href="#02739d845044a6cd860043a088ae0a786829cd56">
docs/snakefiles/modularization.rst
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<a href="#dfeb7b6e739ba66056c1799c63a5a39c7698b59f">
docs/snakefiles/rules.rst
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<a href="#5d07e7d72637aa0d59c89d381fe6dc4cf46e2491">
pyproject.toml
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<a href="#8c91c0296909b5ea3c496fde69e9dc44a6c6ae5f">
setup.cfg
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<a href="#8e2edce0d507e1297474f25c00cae94258db38d8">
setup.py
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<li class="file-stats">
<a href="#d366205d7cd679ff6d4a61f70728e92537101763">
snakemake/__init__.py
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<a href="#5e16cbeea010f59dbef52f8950f4873c94f39c7e">
snakemake/_version.py
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<li class="file-stats">
<a href="#9821437dfb3fff8383b6066a2a3c7aa3f6712a32">
snakemake/dag.py
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<li class="file-stats">
<a href="#f26ea241de6ff4cfc0be3675c4f2da7114bd889d">
snakemake/exceptions.py
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<li class="file-stats">
<a href="#7610d24f21cc1508e60687b4a0c7e940a75ca358">
snakemake/executors/__init__.py
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<h5 style="margin-top: 10px; margin-bottom: 10px; font-size: 0.875rem;">
The diff was not included because it is too large.
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<p style="font-size: small; color: #666;">
—
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<a href="https://salsa.debian.org/med-team/snakemake/-/compare/8b0906316e05768a9638948aee04ba5f95e9b319...40dd5c453ab303dced16e128ada332fb62ebfbe0">View it on GitLab</a>.
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