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<div class="content">
<h3 style="margin-top: 20px; margin-bottom: 10px;">
Andreas Tille pushed to branch upstream at <a href="https://salsa.debian.org/med-team/last-align">Debian Med / last-align</a>
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<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
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<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/last-align/-/commit/2437b5280a0a810b699ee98ca59c8bbb848d93d2">2437b528</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-02-05T20:48:31+01:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #303030; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fafafa; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dbdbdb;'>New upstream version 1447</pre>
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<h4 style="margin-top: 10px; margin-bottom: 10px;">
30 changed files:
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<li class="file-stats">
<a href="#2eec104bd40706dceb555b7fffb342760f3cbc59">
bin/last-train
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<li class="file-stats">
<a href="#b81b5de5f7bfd818c69285e09a1e8f1bef73444e">
bin/maf-convert
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<li class="file-stats">
<a href="#6d861ad2ad3211511db76f729355bd88ffd88a1f">
doc/last-train.rst
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<li class="file-stats">
<a href="#92d9b0529e219d061bbcde273352ff9d2523754c">
doc/lastdb.rst
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<li class="file-stats">
<a href="#4543c6ba972a23fa884543e091d830105a84288f">
doc/maf-convert.rst
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<li class="file-stats">
<a href="#5e55dbeefff2057b414960d9467d183920e31b8a">
src/Alignment.cc
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<li class="file-stats">
<a href="#bd17e03c676d289c9cc5bb117da6d9d2bde74764">
src/Alignment.hh
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<li class="file-stats">
<a href="#8758dc959aa5524be83960d0bfd56945bc432a26">
src/AlignmentWrite.cc
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<li class="file-stats">
<a href="#ab919b3eb596acbd0affb15613fb99fee03165d8">
src/Alphabet.cc
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<a href="#50bbab11fc8cfa2a0b2a909b040fb5e75e3bf421">
src/Alphabet.hh
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<li class="file-stats">
<a href="#8f014a93cf121af8fe88d03244d4d4b173d32a6d">
src/GappedXdropAligner.cc
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<li class="file-stats">
<a href="#7dc5c3172a020d4f7642b87bcfe987675bd222a7">
src/GappedXdropAligner.hh
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<li class="file-stats">
<a href="#fe292bc81098de48178ce05c67f141fe55186348">
src/GappedXdropAlignerDna.cc
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<li class="file-stats">
<a href="#35f9fe39feef01a50cdd57a941b460c37cbaffba">
src/GappedXdropAlignerPssm.cc
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<li class="file-stats">
<a href="#54925a3b3158a751c06af7acce6d06070e5ac813">
src/LastdbArguments.cc
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<li class="file-stats">
<a href="#175041df6bc020fee30bcd9a8a104c617f1d9feb">
src/LastdbArguments.hh
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<li class="file-stats">
<a href="#166cfea9495f22785b4b042c1f067c32d00762cb">
src/MultiSequence.cc
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<li class="file-stats">
<a href="#de5a928be30a99dcb150a5f687171caed2e9c00c">
src/MultiSequence.hh
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<li class="file-stats">
<a href="#cd02526d366c6da910b92885df9a61de1e0d3b4c">
src/SegmentPair.cc
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<li class="file-stats">
<a href="#8f3dcb98b241f5b872730585aeca6294b7f859bc">
src/SegmentPair.hh
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<li class="file-stats">
<a href="#bb715be022c826aae5cd901677082c4701d4254f">
src/SubsetSuffixArray.hh
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<li class="file-stats">
<a href="#a769b4c6047b484a507a8d8b92ec8a622dc48140">
src/SubsetSuffixArraySearch.cc
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<li class="file-stats">
<a href="#3f98641a7f74dabb028b89df7d2328b7bf877d93">
<span class="deleted-file">
−
src/gaplessPssmXdrop.cc
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<li class="file-stats">
<a href="#40646e1a04371499bc802ca99e0316bf59db3fca">
src/gaplessPssmXdrop.hh
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<li class="file-stats">
<a href="#28b4de7d596aff51e8ba3cda362eeee6532a7e16">
<span class="deleted-file">
−
src/gaplessTwoQualityXdrop.cc
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<li class="file-stats">
<a href="#d5b99c0e5a39668e82c44131e528a05b9162fc52">
src/gaplessTwoQualityXdrop.hh
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<li class="file-stats">
<a href="#d759c7285958229b52f9eb7256235bb210bd338d">
<span class="deleted-file">
−
src/gaplessXdrop.cc
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<li class="file-stats">
<a href="#8389b03e0231dbb0d21bad07519403df2565779c">
src/gaplessXdrop.hh
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<li class="file-stats">
<a href="#6f06cc5de9b7ac057e2bab4944683b3802e6b62f">
src/last.hh
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<li class="file-stats">
<a href="#a6e382f28bfc81d7455aa5cc9b1ac92939cbf40a">
src/lastal.cc
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<h5 style="margin-top: 10px; margin-bottom: 10px; font-size: 0.875rem;">
The diff was not included because it is too large.
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