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<div class="content">
<h3 style="margin-top: 20px; margin-bottom: 10px;">
Michael R. Crusoe pushed to branch upstream at <a href="https://salsa.debian.org/med-team/diamond-aligner">Debian Med / diamond-aligner</a>
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<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
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<ul>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/diamond-aligner/-/commit/04189ed45ed7a508d629d106a74328774ecc398d">04189ed4</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2023-02-20T12:10:49+01:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.8125rem; color: #333238; position: relative; font-family: "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 2.1.1</pre>
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<h4 style="margin-top: 10px; margin-bottom: 10px;">
30 changed files:
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<li class="file-stats">
<a href="#9a2aa4db38d3115ed60da621e012c0efc0172aae">
CMakeLists.txt
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<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
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<li class="file-stats">
<a href="#ba308c53c268704c3008f5e2e6e8129f9f6bf3fe">
src/ChangeLog
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<li class="file-stats">
<a href="#5a2381540b8362260dcaa6747086bb358097256e">
src/align/extend.cpp
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<li class="file-stats">
<a href="#bf2f09cbd84aa17f89d5db00e4ef7fde6b953c36">
src/align/global_ranking/table.cpp
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<li class="file-stats">
<a href="#268e3162ba3f39e76a3c9e2c290fbe68e23ff93b">
<span class="deleted-file">
−
src/align/kmer_filter.cpp
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<li class="file-stats">
<a href="#79b081d050ff058cc4444df01970041d95b03792">
src/align/legacy/query_mapper.cpp
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<li class="file-stats">
<a href="#0b08202a0e53b77834bad522a650ac3fd069ede6">
src/align/load_hits.h
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<li class="file-stats">
<a href="#6d09ff6bcfac65c792218c53e21ca1a9e62a26ba">
src/align/target.h
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<li class="file-stats">
<a href="#76d5a97c09cca591280144de40f9c04a5ec57ef7">
src/basic/basic.cpp
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<li class="file-stats">
<a href="#fe8c534c15ea9cf93547993244c3ab903c4895ff">
src/basic/config.cpp
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<li class="file-stats">
<a href="#79a175a8b141cc4f06683108fcd39b79a555f1cd">
src/basic/config.h
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<li class="file-stats">
<a href="#da280a51d91809345347036c4e31920b2c744ab7">
src/basic/const.h
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<li class="file-stats">
<a href="#8a5f881f4845d400ba2859f82f929e365c1a4601">
src/basic/value.h
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<li class="file-stats">
<a href="#58d7c1b60192f25ddb57682da626d8207f8b0cf9">
src/cluster/cascaded/recluster.cpp
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<li class="file-stats">
<a href="#e32575ef2e63f2a583912aa5a951281d34cc36fb">
src/cluster/helpers.cpp
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<li class="file-stats">
<a href="#e55ddca2a520cf174a9c563feef3e91ea2585c1b">
src/cluster/incremental/config.cpp
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<li class="file-stats">
<a href="#9d1370f8c2e2e73afbc0b2b55c553f9890077428">
src/cluster/incremental/run.cpp
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<li class="file-stats">
<a href="#347f215615f06265eeffada9952dbc291937c580">
src/data/dmnd/dmnd.cpp
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<li class="file-stats">
<a href="#5c4d25a3bf084a13332788f6b32777e540c59b50">
src/data/sequence_file.cpp
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<li class="file-stats">
<a href="#7eda2becf4c384b528eb7a1040614483fa9b7681">
src/dp/pfscan/pfscan.cpp
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<li class="file-stats">
<a href="#b2bcf993fb52ba82fdb4a8c71354416ce9de67a8">
src/dp/pfscan/pfscan.h
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<li class="file-stats">
<a href="#fca48027490c3c37433bb7bfe054875f42886c49">
src/dp/score_vector_int8.h
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<li class="file-stats">
<a href="#b71c617f6c21dd8f42636e50b3499b22a233c5a1">
src/dp/swipe/anchored.h
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<li class="file-stats">
<a href="#cd13012b0d4dbb2e9932d94c133e4ddf9a95301a">
src/output/daa/daa_write.cpp
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<li class="file-stats">
<a href="#5b87a6bf1d7d697a31809518eed0a23641abb6b3">
src/output/daa/view.cpp
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<li class="file-stats">
<a href="#886ff73257cc2fb53eac3407b1ad5694ed69a174">
src/output/output.h
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<li class="file-stats">
<a href="#47835b94538bcd69b2fa4694d560d8c54a48c330">
src/output/output_format.cpp
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<li class="file-stats">
<a href="#3466795a3b58e7d6d79f265ab66e6bab752d5d36">
src/output/target_culling.h
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<li class="file-stats">
<a href="#deee33639c371a37669586ac131ec304c2687a8b">
src/search/hit.h
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The diff was not included because it is too large.
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