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<h3 style="margin-top: 20px; margin-bottom: 10px;">
Andreas Tille pushed to branch master at <a href="https://salsa.debian.org/med-team/trinityrnaseq">Debian Med / trinityrnaseq</a>
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<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
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<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/trinityrnaseq/-/commit/1db989c5146e836e99f09962924d7bfe4b3cb2c0">1db989c5</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-03-02T08:21:31+01:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 2.15.1+dfsg</pre>
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<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/trinityrnaseq/-/commit/964f94355759a5a2d39089190517506b47315003">964f9435</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-03-02T08:25:00+01:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Update upstream source from tag 'upstream/2.15.1+dfsg'
Update to upstream version '2.15.1+dfsg'
with Debian dir c0ee39c54085d0b8fbd957fd5d1abadf6791728b</pre>
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<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/trinityrnaseq/-/commit/94bbafebee1cbd078a73f46717c5308d82a4f06b">94bbafeb</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-03-02T08:34:50+01:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Add TODO
</pre>
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<h4 style="margin-top: 10px; margin-bottom: 10px;">
22 changed files:
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<li class="file-stats">
<a href="#56cd058343dc500d70fb6c2c4aac98dc5da7cbe5">
Docker/Dockerfile
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<li class="file-stats">
<a href="#bbb101bc2f90c8750e858f6e53300be082686b61">
Docker/VERSION.txt
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<li class="file-stats">
<a href="#c9bcf4562e24e825ed76d08ca2507077e897cc7a">
PerlLib/CIGAR.pm
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<li class="file-stats">
<a href="#f5a5f7c46fdf1e2484b0119f857828045f0c7b4c">
PerlLib/CMD_processor.pm
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<li class="file-stats">
<a href="#930dc2aeede52e0c06965d96e3aa59f634a97bf8">
PerlLib/Fasta_retriever.pm
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<li class="file-stats">
<a href="#504f7bec956b3f8aed2ff704531c56a1863dfcdb">
PerlLib/GFF3_alignment_utils.pm
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<li class="file-stats">
<a href="#8e3e83c929a2b6efa5460ddfa33c9ed4fac11bae">
PerlLib/GFF3_utils.pm
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<li class="file-stats">
<a href="#3dd9569072a689269db942d154b7510742f99552">
PerlLib/GTF_utils.pm
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<li class="file-stats">
<a href="#5449ee5b0e01f1ff763f4fed9a35aea3cf235686">
PerlLib/Gene_obj.pm
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<li class="file-stats">
<a href="#c95fed951712cc7b60522cc6c9eba6b4cf8ca9f5">
PerlLib/Longest_orf.pm
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<li class="file-stats">
<a href="#0ff97693f32b05fb35ac7186ead5e811440dd06d">
PerlLib/Nuc_translator.pm
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<li class="file-stats">
<a href="#b77936595c34c31d20ab18ed681357f88936661e">
PerlLib/Process_cmd.pm
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<li class="file-stats">
<a href="#197167c4dfebe10cd3362cb6b3688cf4aa340122">
PerlLib/SingleLinkageClusterer.pm
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<li class="file-stats">
<a href="#52816dc62981fa873d938cc6b6585ff044a47699">
PerlLib/Thread_helper.pm
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<li class="file-stats">
<a href="#fe1f3f0432df49e752b342651a4544704be40e18">
Trinity
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<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#47bc5d0dfe2f4008180506114f96d4d825b32a7e">
trinity-plugins/ParaFly/Makefile
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<li class="file-stats">
<a href="#58808a323b7597fcbb93eb50eb2f2794b489842d">
trinity-plugins/ParaFly/bin/ParaFly
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<li class="file-stats">
<a href="#33c4add2be34606506deef033dd798faa925bf9c">
trinity-plugins/ParaFly/config.h
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<li class="file-stats">
<a href="#741cb215f5284b442c1e146e3317a21495246913">
trinity-plugins/ParaFly/config.h.in
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<li class="file-stats">
<a href="#94934439ac72e34558054dc65f3761b5657c8af0">
trinity-plugins/ParaFly/config.log
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<li class="file-stats">
<a href="#0d0b4d11f0d6e3a42906aff6ec26901045dda0e7">
trinity-plugins/ParaFly/config.status
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<h5 style="margin-top: 10px; margin-bottom: 10px; font-size: 0.875rem;">
The diff was not included because it is too large.
</h5>
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