<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en" style='--code-editor-font: var(--default-mono-font, "Menlo"), DejaVu Sans Mono, Liberation Mono, Consolas, Ubuntu Mono, Courier New, andale mono, lucida console, monospace;'>
<head>
<meta content="text/html; charset=US-ASCII" http-equiv="Content-Type">
<title>
GitLab
</title>
<style data-premailer="ignore" type="text/css">
a { color: #1068bf; }
</style>
<style>img {
max-width: 100%; height: auto;
}
body {
font-size: 0.875rem;
}
body {
-webkit-text-shadow: rgba(255,255,255,0.01) 0 0 1px;
}
body {
font-family: var(--default-regular-font, -apple-system),BlinkMacSystemFont,"Segoe UI",Roboto,"Noto Sans",Ubuntu,Cantarell,"Helvetica Neue",sans-serif,"Apple Color Emoji","Segoe UI Emoji","Segoe UI Symbol","Noto Color Emoji"; font-size: inherit;
}
</style>
</head>
<body style='font-size: inherit; -webkit-text-shadow: rgba(255,255,255,0.01) 0 0 1px; font-family: var(--default-regular-font, -apple-system),BlinkMacSystemFont,"Segoe UI",Roboto,"Noto Sans",Ubuntu,Cantarell,"Helvetica Neue",sans-serif,"Apple Color Emoji","Segoe UI Emoji","Segoe UI Symbol","Noto Color Emoji";'>
<div class="content">
<h3 style="margin-top: 20px; margin-bottom: 10px;">
Alexandre Mestiashvili pushed to branch upstream at <a href="https://salsa.debian.org/med-team/subread">Debian Med / subread</a>
</h3>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
</h4>
<ul>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/subread/-/commit/1a8f93e9a1b765f664a13936128f44c4a8a57d24">1a8f93e9</a></strong>
<div>
<span> by Alexandre Mestiashvili </span> <i> at 2023-03-11T12:46:46+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 2.0.4+dfsg</pre>
</li>
</ul>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
23 changed files:
</h4>
<ul>
<li class="file-stats">
<a href="#19408922082cf16882a0f542094cf5545bf10f74">
<span class="new-file">
+
annotation/mm39_RefSeq_exon.txt.gz
</span>
</a>
</li>
<li class="file-stats">
<a href="#9b9715372d0cd39d21711a077b6f2ae42fb45135">
doc/SubreadUsersGuide.tex
</a>
</li>
<li class="file-stats">
<a href="#7079f81404dcaadc0154c53a419b2d1cb5f253e6">
src/HelperFunctions.c
</a>
</li>
<li class="file-stats">
<a href="#e8151656777acee64e1f016170e308d49d0a7f96">
src/HelperFunctions.h
</a>
</li>
<li class="file-stats">
<a href="#c1b8d333291fcba8482e6874c5a8cf61b565242c">
src/Makefile.Linux
</a>
</li>
<li class="file-stats">
<a href="#296b4814ae931def4e82a8f84e22f6c24f5b3b14">
src/core-indel.c
</a>
</li>
<li class="file-stats">
<a href="#269c5079f32c711431ad058d1e3ac63987f29255">
src/core-indel.h
</a>
</li>
<li class="file-stats">
<a href="#431a9a7f741eae0019b2785bf4ae504ca6fe0271">
src/core-interface-subjunc.c
</a>
</li>
<li class="file-stats">
<a href="#d7c9610d0bb39f36045810aea42dfc930a2d041f">
src/core-junction.c
</a>
</li>
<li class="file-stats">
<a href="#a26ea438a2b6aee04f419d17c87da7e9b997e7ae">
src/core.c
</a>
</li>
<li class="file-stats">
<a href="#3ff152fe6bda3f5dfee9715abff394de66921551">
src/core.h
</a>
</li>
<li class="file-stats">
<a href="#0cd9a7b1d1859b9b5f8aa2a313c4ccab061915c5">
src/gen_rand_reads.c
</a>
</li>
<li class="file-stats">
<a href="#18d5c843fdde01c811087dacdcf7dbe1f38af4d3">
src/gene-algorithms.c
</a>
</li>
<li class="file-stats">
<a href="#40d901ab9acccc80547ea96bc7257d6bbd327710">
src/gene-algorithms.h
</a>
</li>
<li class="file-stats">
<a href="#6612baeecf620e30ab51b9fb8e8a2afe1d40812b">
src/hashtable.c
</a>
</li>
<li class="file-stats">
<a href="#30c07b024c4fcae2a43837631bde802ba5d8e371">
src/hashtable.h
</a>
</li>
<li class="file-stats">
<a href="#db883abc086707d455e41cc6745055f2475bcc7f">
src/index-builder.c
</a>
</li>
<li class="file-stats">
<a href="#8ef51f137a175e45ca9d53b6eaeb6f55a775893d">
src/input-blc.c
</a>
</li>
<li class="file-stats">
<a href="#1d3ea1dfb44bc278d2d0dc98242cbaff49bcccb9">
src/input-blc.h
</a>
</li>
<li class="file-stats">
<a href="#af240e90f84ee342e36f1a8ee0eb08f1a4b16a3d">
src/input-files.c
</a>
</li>
<li class="file-stats">
<a href="#6907133cceb8c785482dac4a3125dbff95a3d8e2">
src/input-files.h
</a>
</li>
<li class="file-stats">
<a href="#76cc7b82fd823387133c6778766e61c15828100c">
src/makefile.version
</a>
</li>
<li class="file-stats">
<a href="#f0f6828628b764f4bbcc239f3b0257341f4b5517">
src/propmapped.c
</a>
</li>
</ul>
<h5 style="margin-top: 10px; margin-bottom: 10px; font-size: 0.875rem;">
The diff was not included because it is too large.
</h5>
</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #737278;">
—
<br>
<a href="https://salsa.debian.org/med-team/subread/-/commit/1a8f93e9a1b765f664a13936128f44c4a8a57d24">View it on GitLab</a>.
<br>
You're receiving this email because of your account on <a target="_blank" rel="noopener noreferrer" href="https://salsa.debian.org">salsa.debian.org</a>. <a href="https://salsa.debian.org/-/profile/notifications" target="_blank" rel="noopener noreferrer" class="mng-notif-link">Manage all notifications</a> · <a href="https://salsa.debian.org/help" target="_blank" rel="noopener noreferrer" class="help-link">Help</a>
<script type="application/ld+json">{"@context":"http://schema.org","@type":"EmailMessage","action":{"@type":"ViewAction","name":"View Commit","url":"https://salsa.debian.org/med-team/subread/-/commit/1a8f93e9a1b765f664a13936128f44c4a8a57d24"}}</script>
</p>
</div>
</body>
</html>