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<h3 style="margin-top: 20px; margin-bottom: 10px;">
Rebecca N. Palmer pushed to branch main at <a href="https://salsa.debian.org/med-team/snakemake">Debian Med / snakemake</a>
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Commits:
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<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/snakemake/-/commit/5dce27f975339206b5900b3a16963a7322d57e8f">5dce27f9</a></strong>
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<span> by Rebecca N. Palmer </span> <i> at 2023-06-12T07:29:40+01:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 7.28.1</pre>
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<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/snakemake/-/commit/e5eff0720937fa4fceae63eb5d739cfd404c06b3">e5eff072</a></strong>
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<span> by Rebecca N. Palmer </span> <i> at 2023-06-12T07:30:08+01:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Update upstream source from tag 'upstream/7.28.1'
Update to upstream version '7.28.1'
with Debian dir 36571f621b1295c3636a1fd06d5e5f1fd1a120e4</pre>
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<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/snakemake/-/commit/da9e1967cd9794a40b2702d9f4cd746b18181878">da9e1967</a></strong>
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<span> by Rebecca N. Palmer </span> <i> at 2023-06-12T07:39:53+01:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Update d/copyright.
</pre>
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<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/snakemake/-/commit/4c1e77d08e89478b1447b5e419bbe61a7936ece3">4c1e77d0</a></strong>
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<span> by Rebecca N. Palmer </span> <i> at 2023-06-12T08:03:23+01:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Refresh patches.
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<h4 style="margin-top: 10px; margin-bottom: 10px;">
30 changed files:
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.github/workflows/docker-publish.yml
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.github/workflows/main.yml
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.github/workflows/test-flux.yaml
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CHANGELOG.md
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Dockerfile
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debian/changelog
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debian/copyright
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debian/patches/cirumvent-retry.patch
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debian/patches/fix_test_pytest.patch
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debian/patches/python2to3.patch
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debian/patches/python3.patch
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debian/patches/remove-yte.patch
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debian/patches/remove_ccbysa_snippets.patch
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debian/patches/reproducible-build.patch
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debian/patches/skip-tests-with-slurm.patch
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debian/patches/test_from_any_directory.patch
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docs/executing/cloud.rst
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docs/executing/cluster.rst
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docs/executor_tutorial/flux.rst
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docs/snakefiles/modularization.rst
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docs/snakefiles/remote_files.rst
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docs/tutorial/setup.rst
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misc/nano/syntax/snakemake.nanorc
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The diff was not included because it is too large.
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