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<h3 style="margin-top: 20px; margin-bottom: 10px;">
Andreas Tille pushed to branch master at <a href="https://salsa.debian.org/med-team/cnvkit">Debian Med / cnvkit</a>
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<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
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<ul>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/cnvkit/-/commit/c1841c0fb5ef447dee9357b2fa99d56724e9beb2">c1841c0f</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-07-04T11:37:27+02:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>routine-update: New upstream version
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</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/cnvkit/-/commit/4d541703d2b03d29a1dabb99d8fbc613f88ad179">4d541703</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-07-04T11:37:28+02:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 0.9.10</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/cnvkit/-/commit/e9181a6541bc60856d342919b55de6b5d6d900e7">e9181a65</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-07-04T11:38:15+02:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Update upstream source from tag 'upstream/0.9.10'
Update to upstream version '0.9.10'
with Debian dir b1f2475075fb93c5911c870a48d91de717dcce09</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/cnvkit/-/commit/dbacfed877ac8d37f845dd6eb60b7c7bdc20db9b">dbacfed8</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-07-04T11:38:15+02:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>routine-update: Standards-Version: 4.6.2
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/cnvkit/-/commit/557f248c1515ca1fd96e1803a87e9f91bf26d6ac">557f248c</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-07-04T12:04:38+02:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Adapt patches
</pre>
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<h4 style="margin-top: 10px; margin-bottom: 10px;">
17 changed files:
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.codecov.yml
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.github/workflows/tests-tox.yaml
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<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">
.gitignore
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.readthedocs.yaml
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.travis.yml
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<a href="#561b88e19de321ca62c7590bbb350765fb110905">
README.rst
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<li class="file-stats">
<a href="#42d036b285f793fa4706218270f28c4e0af74569">
cnvlib/_version.py
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<li class="file-stats">
<a href="#0bb9fa1a6130cb3bdc4393b8b2032ae11d3c9f16">
cnvlib/access.py
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<a href="#023ef3cf31e96bcfb114b17e9eeee40b3559216c">
cnvlib/antitarget.py
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<a href="#0dd6dacf3a32d43e909fde3613a86d002941bcc6">
cnvlib/autobin.py
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<a href="#15480036fba0b7dad855fda6856199d0684fa1c9">
cnvlib/batch.py
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<a href="#bdde3f61ae7f7287d446832829cfd862bd0c5b6e">
cnvlib/bintest.py
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<li class="file-stats">
<a href="#5650a2db29370ab5ab223eb5e22f2cda64ad6185">
cnvlib/call.py
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<li class="file-stats">
<a href="#6954ca2a176e46a2c2f6da9790b0d7ab39e466e8">
cnvlib/cluster.py
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<li class="file-stats">
<a href="#9c039cbe0d6f382867ffe4356a402c3d571fcb89">
cnvlib/cmdutil.py
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<a href="#3c97ce14774c9dcaaf77c07a55b41a9bb29613dd">
cnvlib/cnary.py
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<li class="file-stats">
<a href="#3bfd834a3fe21bbe615fb5efa8925f3e9d88210e">
cnvkit.py
→
cnvlib/cnvkit.py
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The diff was not included because it is too large.
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