<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en" style='--code-editor-font: var(--default-mono-font, "Menlo"), DejaVu Sans Mono, Liberation Mono, Consolas, Ubuntu Mono, Courier New, andale mono, lucida console, monospace;'>
<head>
<meta content="text/html; charset=US-ASCII" http-equiv="Content-Type">
<title>
GitLab
</title>
<style data-premailer="ignore" type="text/css">
a { color: #1068bf; }
</style>
<style>img {
max-width: 100%; height: auto;
}
body {
font-size: 0.875rem;
}
body {
-webkit-text-shadow: rgba(255,255,255,0.01) 0 0 1px;
}
body {
font-family: var(--default-regular-font, -apple-system),BlinkMacSystemFont,"Segoe UI",Roboto,"Noto Sans",Ubuntu,Cantarell,"Helvetica Neue",sans-serif,"Apple Color Emoji","Segoe UI Emoji","Segoe UI Symbol","Noto Color Emoji"; font-size: inherit;
}
</style>
</head>
<body style='font-size: inherit; -webkit-text-shadow: rgba(255,255,255,0.01) 0 0 1px; font-family: var(--default-regular-font, -apple-system),BlinkMacSystemFont,"Segoe UI",Roboto,"Noto Sans",Ubuntu,Cantarell,"Helvetica Neue",sans-serif,"Apple Color Emoji","Segoe UI Emoji","Segoe UI Symbol","Noto Color Emoji";'>
<div class="content">
<h3 style="margin-top: 20px; margin-bottom: 10px;">
Andreas Tille pushed to branch master at <a href="https://salsa.debian.org/med-team/cnvkit">Debian Med / cnvkit</a>
</h3>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
</h4>
<ul>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/cnvkit/-/commit/a2fa2e81465c0252812f40457346b0e97b412066">a2fa2e81</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-07-10T17:19:04+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Do not generate manpages at build time but rather at developers machine in local install
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/cnvkit/-/commit/eaa0340e24ffdf5db43163cc2ed860b59ea82bc6">eaa0340e</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-07-10T17:22:14+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Lintian-override for all *.py files
</pre>
</li>
</ul>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
30 changed files:
</h4>
<ul>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#ebcf9854ee19af4b7bf8405b283789c18769680f">
<span class="new-file">
+
debian/createmanpages
</span>
</a>
</li>
<li class="file-stats">
<a href="#3f6cf269ca0a28759361859b7fc44a915b00a815">
debian/genmanpages.py
</a>
</li>
<li class="file-stats">
<a href="#efc7fe57b5983b0283c6410fceef7e74f687aeb5">
debian/lintian-overrides
</a>
</li>
<li class="file-stats">
<a href="#7338b63cae8118397fda8bdd94f39c302676b9fc">
<span class="new-file">
+
debian/man/cnv_annotate.py.1
</span>
</a>
</li>
<li class="file-stats">
<a href="#6fe2060a2e38f986dc28498f439de83e3750363c">
<span class="new-file">
+
debian/man/cnv_expression_correlate.py.1
</span>
</a>
</li>
<li class="file-stats">
<a href="#99aceb3749adb39d1b871554f5dcbff6ccea3350">
<span class="new-file">
+
debian/man/cnvkit-access.1
</span>
</a>
</li>
<li class="file-stats">
<a href="#aeb3d0cf375436eda442938e0510207e683ec7a8">
<span class="new-file">
+
debian/man/cnvkit-antitarget.1
</span>
</a>
</li>
<li class="file-stats">
<a href="#82e81f7766cd0c63458d4f8f3d49418c9b0a6a07">
<span class="new-file">
+
debian/man/cnvkit-autobin.1
</span>
</a>
</li>
<li class="file-stats">
<a href="#bb1c4ae447594dfbc55b244e3bf8802d62ad5833">
<span class="new-file">
+
debian/man/cnvkit-batch.1
</span>
</a>
</li>
<li class="file-stats">
<a href="#187602c80caf66731eff83c71037f82903de719a">
<span class="new-file">
+
debian/man/cnvkit-bintest.1
</span>
</a>
</li>
<li class="file-stats">
<a href="#6db009c91f980a7a8384f3fe0b1b2224bd2e6948">
<span class="new-file">
+
debian/man/cnvkit-breaks.1
</span>
</a>
</li>
<li class="file-stats">
<a href="#b95b56c51c50ed6c6a8586cb208e63b19e91ae19">
<span class="new-file">
+
debian/man/cnvkit-call.1
</span>
</a>
</li>
<li class="file-stats">
<a href="#07afa87ace1203ae884732455fb0c4e1988b9ede">
<span class="new-file">
+
debian/man/cnvkit-coverage.1
</span>
</a>
</li>
<li class="file-stats">
<a href="#5e4e00c4b106f30e169ab63d80a39447a313eb76">
<span class="new-file">
+
debian/man/cnvkit-diagram.1
</span>
</a>
</li>
<li class="file-stats">
<a href="#e83cb205e9711937d51372657dd9ec9e09fc3d20">
<span class="new-file">
+
debian/man/cnvkit-export.1
</span>
</a>
</li>
<li class="file-stats">
<a href="#62a60ac23d802ef23cb8318f6ac6b791a9c01fac">
<span class="new-file">
+
debian/man/cnvkit-fix.1
</span>
</a>
</li>
<li class="file-stats">
<a href="#97cced35101762e3409d67a16c1cca688e5a7632">
<span class="new-file">
+
debian/man/cnvkit-genemetrics.1
</span>
</a>
</li>
<li class="file-stats">
<a href="#3f74d46ceb7bbe644bc96bef137efd21482a9d4a">
<span class="new-file">
+
debian/man/cnvkit-heatmap.1
</span>
</a>
</li>
<li class="file-stats">
<a href="#8798aa3a0ddaa482e7b7ab9058ceb310d222cb65">
<span class="new-file">
+
debian/man/cnvkit-import-picard.1
</span>
</a>
</li>
<li class="file-stats">
<a href="#37c27f603286ec6192b11484c757440b1e13536c">
<span class="new-file">
+
debian/man/cnvkit-import-rna.1
</span>
</a>
</li>
<li class="file-stats">
<a href="#1b6d7433196b15e5c9f4eebf4af54a6fb6c23fcb">
<span class="new-file">
+
debian/man/cnvkit-import-seg.1
</span>
</a>
</li>
<li class="file-stats">
<a href="#6ce947e61a41e0b606181d34fa9e638ce77e07a6">
<span class="new-file">
+
debian/man/cnvkit-import-theta.1
</span>
</a>
</li>
<li class="file-stats">
<a href="#694bc455fc803bcd6e7abb2a5cc27c3373abd8b9">
<span class="new-file">
+
debian/man/cnvkit-metrics.1
</span>
</a>
</li>
<li class="file-stats">
<a href="#52d0458383d3c57e8e27328367326ac65c533475">
<span class="new-file">
+
debian/man/cnvkit-reference.1
</span>
</a>
</li>
<li class="file-stats">
<a href="#e8029588d3d2c4900ccd5dcb38836afb9e38fcc5">
<span class="new-file">
+
debian/man/cnvkit-scatter.1
</span>
</a>
</li>
<li class="file-stats">
<a href="#2598cd74befd4374f40a20e84189e70c2d22b322">
<span class="new-file">
+
debian/man/cnvkit-segment.1
</span>
</a>
</li>
<li class="file-stats">
<a href="#acaab78b6da9cf29c99d4ac730192325e8eb155f">
<span class="new-file">
+
debian/man/cnvkit-segmetrics.1
</span>
</a>
</li>
<li class="file-stats">
<a href="#1219bd702e5d1163ab993f3a0cb8b46a38764d03">
<span class="new-file">
+
debian/man/cnvkit-sex.1
</span>
</a>
</li>
<li class="file-stats">
<a href="#057873a78c5a19cafb5bbb728ad60ed9e1fbcb28">
<span class="new-file">
+
debian/man/cnvkit-target.1
</span>
</a>
</li>
</ul>
<h5 style="margin-top: 10px; margin-bottom: 10px; font-size: 0.875rem;">
The diff was not included because it is too large.
</h5>
</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #737278;">
—
<br>
<a href="https://salsa.debian.org/med-team/cnvkit/-/compare/94962fde7fb97c144785c4dbaa8851d826130b11...eaa0340e24ffdf5db43163cc2ed860b59ea82bc6">View it on GitLab</a>.
<br>
You're receiving this email because of your account on <a target="_blank" rel="noopener noreferrer" href="https://salsa.debian.org">salsa.debian.org</a>. <a href="https://salsa.debian.org/-/profile/notifications" target="_blank" rel="noopener noreferrer" class="mng-notif-link">Manage all notifications</a> · <a href="https://salsa.debian.org/help" target="_blank" rel="noopener noreferrer" class="help-link">Help</a>
</p>
</div>
</body>
</html>