<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en" style='--code-editor-font: var(--default-mono-font, "Menlo"), DejaVu Sans Mono, Liberation Mono, Consolas, Ubuntu Mono, Courier New, andale mono, lucida console, monospace;'>
<head>
<meta content="text/html; charset=US-ASCII" http-equiv="Content-Type">
<title>
GitLab
</title>

<style data-premailer="ignore" type="text/css">
a { color: #1068bf; }
</style>


<style>img {
max-width: 100%; height: auto;
}
body {
font-size: 0.875rem;
}
body {
-webkit-text-shadow: rgba(255,255,255,0.01) 0 0 1px;
}
body {
font-family: var(--default-regular-font, -apple-system),BlinkMacSystemFont,"Segoe UI",Roboto,"Noto Sans",Ubuntu,Cantarell,"Helvetica Neue",sans-serif,"Apple Color Emoji","Segoe UI Emoji","Segoe UI Symbol","Noto Color Emoji"; font-size: inherit;
}
</style>
</head>
<body style='font-size: inherit; -webkit-text-shadow: rgba(255,255,255,0.01) 0 0 1px; font-family: var(--default-regular-font, -apple-system),BlinkMacSystemFont,"Segoe UI",Roboto,"Noto Sans",Ubuntu,Cantarell,"Helvetica Neue",sans-serif,"Apple Color Emoji","Segoe UI Emoji","Segoe UI Symbol","Noto Color Emoji";'>
<div class="content">

<h3 style="margin-top: 20px; margin-bottom: 10px;">
Michael R. Crusoe pushed to branch upstream at <a href="https://salsa.debian.org/med-team/seqan-raptor">Debian Med / seqan-raptor</a>
</h3>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
</h4>
<ul>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/seqan-raptor/-/commit/78f1b0ebed0dea45aded971b7b3d0aea941d6aca">78f1b0eb</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2023-07-11T14:17:01+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 3.0.0+ds</pre>
</li>
</ul>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
25 changed files:
</h4>
<ul>
<li class="file-stats">
<a href="#d94622672672a69390631d825d55c7582120624e">
.codecov.yml
</a>
</li>
<li class="file-stats">
<a href="#091aff741808a09242f252264b14f4a9adaa5305">
<span class="new-file">
+
.github/dependabot.yml
</span>
</a>
</li>
<li class="file-stats">
<a href="#fa2ef279d72bbdc788e8a4fe69d4a1f03a6b28da">
<span class="new-file">
+
.github/workflows/ci_codeql.yml
</span>
</a>
</li>
<li class="file-stats">
<a href="#e0c9c79cd7c2b036f3d4af7052ff640f10db03fb">
.github/workflows/ci_coverage.yml
</a>
</li>
<li class="file-stats">
<a href="#39b8f64f600d6f82ecd6ff09faf59350515150e1">
.github/workflows/clang_format.yml

.github/workflows/ci_lint.yml
</a>
</li>
<li class="file-stats">
<a href="#f3a9b35ab9fe12949c3238e30691ccc8ee835234">
.github/workflows/ci_linux.yml
</a>
</li>
<li class="file-stats">
<a href="#21bdc8d15d8465a764ea4114626f9fa34bf5d115">
.github/workflows/ci_macos.yml
</a>
</li>
<li class="file-stats">
<a href="#f505e4233ce49fad1415a4b7e326524efaff7d89">
.github/workflows/ci_misc.yml
</a>
</li>
<li class="file-stats">
<a href="#7712c02818e4ae5d1106bbb1bcdae11a489f6708">
<span class="new-file">
+
.github/workflows/ci_sanitizer.yml
</span>
</a>
</li>
<li class="file-stats">
<a href="#236e68fe0cc34029b27ab56622f9663e61f782d5">
.github/workflows/ci_util.yml

.github/workflows/ci_utility.yml
</a>
</li>
<li class="file-stats">
<a href="#35909784d6231d577fb6343cb2b50a9389bd8b60">
.github/workflows/ci_nextflow.yml

.github/workflows/ci_workflows.yml
</a>
</li>
<li class="file-stats">
<a href="#7445606fbf8f3683cd42bdc54b05d7a0bc2dfc44">
.gitmodules
</a>
</li>
<li class="file-stats">
<a href="#9a2aa4db38d3115ed60da621e012c0efc0172aae">
CMakeLists.txt
</a>
</li>
<li class="file-stats">
<a href="#0834ae016f8fea5cff771880c0be1d55299732ff">
<span class="new-file">
+
CODE_OF_CONDUCT.md
</span>
</a>
</li>
<li class="file-stats">
<a href="#4a8486805915245bbbe2e3c8c1a9d680c6843a82">
LICENSE.md
</a>
</li>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
</li>
<li class="file-stats">
<a href="#b125bfb71f7c9b1293182d2416353645ff1df753">
<span class="new-file">
+
build_system/raptor-config-version.cmake
</span>
</a>
</li>
<li class="file-stats">
<a href="#d9684531f9922d5c6422184ae6b2eb2e50699242">
<span class="new-file">
+
build_system/raptor-config.cmake
</span>
</a>
</li>
<li class="file-stats">
<a href="#50c0329ce2b5f6f7359df4e31c5d56581371cb3d">
<span class="new-file">
+
build_system/raptor-install.cmake
</span>
</a>
</li>
<li class="file-stats">
<a href="#6f49233f83e1b1bd84718a711664eadcd2fcc1ea">
<span class="new-file">
+
build_system/raptor-package.cmake
</span>
</a>
</li>
<li class="file-stats">
<a href="#2ab919150b3f775e58668eb80d6dd504947de087">
<span class="deleted-file">

cmake/raptor_require_benchmark.cmake
</span>
</a>
</li>
<li class="file-stats">
<a href="#f7878a6f3ed0ffa338c24bedcb1a7cb9b670a877">
<span class="deleted-file">

doc/CMakeLists.txt
</span>
</a>
</li>
<li class="file-stats">
<a href="#ef9965a3f035c15497496b3f4b5729b377bb65dd">
<span class="deleted-file">

doc/README.md
</span>
</a>
</li>
<li class="file-stats">
<a href="#a671f9553d3a5a1d6c9fc92a87c87b41e22ea2fb">
<span class="new-file">
+
doc/figures/Raptor_no_title.svg
</span>
</a>
</li>
<li class="file-stats">
<a href="#24bf3df528465a88aed1583981b5bef2b41bceea">
doc/hibf.svg

doc/figures/hibf.svg
</a>
</li>
</ul>
<h5 style="margin-top: 10px; margin-bottom: 10px; font-size: 0.875rem;">
The diff was not included because it is too large.
</h5>

</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #737278;">

<br>
<a href="https://salsa.debian.org/med-team/seqan-raptor/-/commit/78f1b0ebed0dea45aded971b7b3d0aea941d6aca">View it on GitLab</a>.
<br>
You're receiving this email because of your account on <a target="_blank" rel="noopener noreferrer" href="https://salsa.debian.org">salsa.debian.org</a>. <a href="https://salsa.debian.org/-/profile/notifications" target="_blank" rel="noopener noreferrer" class="mng-notif-link">Manage all notifications</a> · <a href="https://salsa.debian.org/help" target="_blank" rel="noopener noreferrer" class="help-link">Help</a>
<script type="application/ld+json">{"@context":"http://schema.org","@type":"EmailMessage","action":{"@type":"ViewAction","name":"View Commit","url":"https://salsa.debian.org/med-team/seqan-raptor/-/commit/78f1b0ebed0dea45aded971b7b3d0aea941d6aca"}}</script>


</p>
</div>
</body>
</html>