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Andreas Tille pushed to branch master at <a href="https://salsa.debian.org/med-team/toil">Debian Med / toil</a>
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<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
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<ul>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/toil/-/commit/45d2e66fd40ecd9cfbcc665d3efffe8b98242578">45d2e66f</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-07-13T15:37:33+02:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 5.11.0</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/toil/-/commit/f9ea859158fdfb21b17694e70d677a9d7971ab71">f9ea8591</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-07-13T15:37:33+02:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>routine-update: New upstream version
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/toil/-/commit/162bfcba7f274aa8f28b5794faeb4f111e562eaa">162bfcba</a></strong>
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<span> by Andreas Tille </span> <i> at 2023-07-13T15:37:41+02:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Update upstream source from tag 'upstream/5.11.0'
Update to upstream version '5.11.0'
with Debian dir 2ab500559c80e3ac3f04cfea7c9c8afe6a56cf23</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/toil/-/commit/6993b99bdd0ee164a7b4f1bdc3180e92f9d91e8d">6993b99b</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-07-13T15:54:46+02:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Update patches
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/toil/-/commit/4fe53a73e815b4282fe91e03b56be31c4d20aa7d">4fe53a73</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-07-13T16:20:34+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Build-Depends: python3-sphinx-autoapi, python3-sphinx-autodoc-typehints, python3-sphinxcontrib.autoprogram
</pre>
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<h4 style="margin-top: 10px; margin-bottom: 10px;">
30 changed files:
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.github/dependabot.yml
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.github/workflows/codeql-analysis.yml
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.gitlab-ci.yml
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Makefile
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contrib/admin/mypy-with-ignore.py
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debian/changelog
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debian/control
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debian/patches/atomic_copy_as_alternative.patch
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docs/appendices/environment_vars.rst
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docs/developingWorkflows/developing.rst
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docs/developingWorkflows/toilAPI.rst
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docs/developingWorkflows/toilAPIJobFunctions.rst
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The diff was not included because it is too large.
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