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<h3 style="margin-top: 20px; margin-bottom: 10px;">
Rebecca N. Palmer pushed to branch main at <a href="https://salsa.debian.org/med-team/snakemake">Debian Med / snakemake</a>
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Commits:
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<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/snakemake/-/commit/79db3f35e28ac4c344797a4d86261a66e9eb15b1">79db3f35</a></strong>
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<span> by Rebecca N. Palmer </span> <i> at 2023-07-23T11:41:33+01:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Re-enable yte-using tests.
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<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/snakemake/-/commit/64dd3c3142d8a017be35ddd6a4607f0ad2baea79">64dd3c31</a></strong>
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<span> by Rebecca N. Palmer </span> <i> at 2023-07-23T11:41:34+01:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 7.30.2</pre>
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<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/snakemake/-/commit/37b2b1d32b18d8db7106160353658af0f7f7af4b">37b2b1d3</a></strong>
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<span> by Rebecca N. Palmer </span> <i> at 2023-07-23T11:41:34+01:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Refresh patches
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30 changed files:
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<a href="#c778226b6c4c0fb51cf7942c8ee1f3d9fc1249d0">
.github/workflows/main.yml
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<a href="#41392f34e199f6eb3009583214aec66db7152a40">
.github/workflows/test-flux.yaml
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<a href="#ab09011fa121d0a2bb9fa4ca76094f2482b902b7">
CHANGELOG.md
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<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
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<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<a href="#135ec01bd10e1ae371b58cf95c485e05336f96b4">
debian/patches/cirumvent-retry.patch
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<a href="#28b0709ae4054bc48d823b79dcfc13f75eccbb7e">
debian/patches/fix_test_pytest.patch
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<a href="#c95b49fcdcf94cb632aec008933196e57cb26c3c">
debian/patches/python2to3.patch
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<a href="#e246f69e945a7c2e9a8e25cfacfcac7714c92b69">
debian/patches/python3.patch
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<a href="#8f735a93bb087196e4fdf34f28d1de6782e8d849">
debian/patches/remove-yte.patch
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<a href="#87ba9cd7574dd1d01d72b7ceb5e99c2bc35089d1">
debian/patches/reproducible-build.patch
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<a href="#ff54e47f5e99b8693330287f0cde3307ea689e5d">
debian/patches/test_from_any_directory.patch
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<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
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<a href="#8c77cc51b09ef1f7b294222180bcdb53ebb70e2f">
debian/tests/run-unit-test
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<a href="#5026e4863ea12b5792ff52f548d70284c3c1a181">
docs/executing/cli.rst
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<a href="#7e143b2e3a88fc7b437114c03b2302f5afa981ec">
docs/executing/cloud.rst
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<a href="#9e4177ae5c810ed5bbbf8563e9a91dfc95913981">
docs/executing/cluster.rst
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<a href="#a84f855f7273030c4dbce9ba8c2ce9c028c5552a">
docs/executor_tutorial/azure_batch.rst
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<a href="#945ec74fc1c17902d98bca84b7a1f0dfd755c01b">
docs/snakefiles/deployment.rst
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<a href="#dfeb7b6e739ba66056c1799c63a5a39c7698b59f">
docs/snakefiles/rules.rst
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<a href="#8c91c0296909b5ea3c496fde69e9dc44a6c6ae5f">
setup.cfg
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<li class="file-stats">
<a href="#d366205d7cd679ff6d4a61f70728e92537101763">
snakemake/__init__.py
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<li class="file-stats">
<a href="#5e16cbeea010f59dbef52f8950f4873c94f39c7e">
snakemake/_version.py
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<a href="#a3f7d8116d97086f34b95ab949c6c99128c6713f">
snakemake/benchmark.py
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<a href="#1f2b5ab7db93d7cfd11a4660dfd26daffc5b38dc">
snakemake/caching/__init__.py
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<a href="#5752dcb5dceb2252f447b747551b9e646cf1865e">
snakemake/caching/local.py
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<a href="#b37760e766d43fdddb378b4d0302d4ad6fa1e3c3">
snakemake/caching/remote.py
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<a href="#959b717a57676faf331e51a5fe763a00dea0032d">
snakemake/common/__init__.py
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<li class="file-stats">
<a href="#42300b585ee7e51f9c6cfad5a88cf8ed5c4bd8fa">
snakemake/cwl.py
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<li class="file-stats">
<a href="#9821437dfb3fff8383b6066a2a3c7aa3f6712a32">
snakemake/dag.py
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The diff was not included because it is too large.
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—
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