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<div class="content">
<h3 style="margin-top: 20px; margin-bottom: 10px;">
Andreas Tille pushed to branch master at <a href="https://salsa.debian.org/med-team/subread">Debian Med / subread</a>
</h3>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
</h4>
<ul>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/subread/-/commit/dcbec95740a3d6c7c67bb8953b5e6c56355703b7">dcbec957</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-08-16T11:03:21+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 2.0.6+dfsg</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/subread/-/commit/ed4bc89eb86cc0d5da8173fb054da24c8cbc372c">ed4bc89e</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-08-16T11:27:12+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 2.0.6+dfsg</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/subread/-/commit/90d25ae9b19fffa603daaa727a97f4ea19650972">90d25ae9</a></strong>
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<span> by Andreas Tille </span> <i> at 2023-08-16T11:41:42+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>routine-update: New upstream version
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/subread/-/commit/9880c7185ef5551f2f181bc83800b99708ca31bc">9880c718</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-08-16T11:48:09+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 2.0.6+dfsg</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/subread/-/commit/00ed9ea255d53280335840bfd89f67912c7cb3a5">00ed9ea2</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-08-16T11:48:33+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Update upstream source from tag 'upstream/2.0.6+dfsg'
Update to upstream version '2.0.6+dfsg'
with Debian dir bafab19c93a31bbce39c9d9e2bb41ab7151d18b1</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/subread/-/commit/b835e0d163e8aefb72321f4dd441ae9629de11d5">b835e0d1</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-08-16T12:39:03+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Refresh patches
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/subread/-/commit/e00ad782976a7df944e9999ca4a2c9d8f7ade333">e00ad782</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-08-16T12:39:48+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Upload to unstable
</pre>
</li>
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<h4 style="margin-top: 10px; margin-bottom: 10px;">
27 changed files:
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<a href="#19408922082cf16882a0f542094cf5545bf10f74">
annotation/mm39_RefSeq_exon.txt.gz
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<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#738bfe9eb140bee362e519ae990e19d7391f9b5f">
debian/patches/typo.patch
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<a href="#7079f81404dcaadc0154c53a419b2d1cb5f253e6">
src/HelperFunctions.c
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<a href="#03b53aa7b28dab0125f2bb23f06f341cab6c608d">
src/SNPCalling.c
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<a href="#de13a8a387b0f71a691e5d23cf74468d6ad7c0a0">
src/core-bigtable.c
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<a href="#296b4814ae931def4e82a8f84e22f6c24f5b3b14">
src/core-indel.c
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<a href="#d7c9610d0bb39f36045810aea42dfc930a2d041f">
src/core-junction.c
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<a href="#a26ea438a2b6aee04f419d17c87da7e9b997e7ae">
src/core.c
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<a href="#08ec1eca3761439e06c59fe3179a2eb515dfacb1">
src/detection-calls.c
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<a href="#69742224d661e373a40a3e0ffe96a88520f33874">
src/flattenAnnotations.c
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<a href="#85f3d21204565d686d9ff50c4696f76a083eef6e">
src/fullscan.c
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<a href="#0cd9a7b1d1859b9b5f8aa2a313c4ccab061915c5">
src/gen_rand_reads.c
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<a href="#18d5c843fdde01c811087dacdcf7dbe1f38af4d3">
src/gene-algorithms.c
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<a href="#40d901ab9acccc80547ea96bc7257d6bbd327710">
src/gene-algorithms.h
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<a href="#6612baeecf620e30ab51b9fb8e8a2afe1d40812b">
src/hashtable.c
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<a href="#30c07b024c4fcae2a43837631bde802ba5d8e371">
src/hashtable.h
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<a href="#db883abc086707d455e41cc6745055f2475bcc7f">
src/index-builder.c
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src/input-blc.c
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<a href="#1d3ea1dfb44bc278d2d0dc98242cbaff49bcccb9">
src/input-blc.h
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<a href="#af240e90f84ee342e36f1a8ee0eb08f1a4b16a3d">
src/input-files.c
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<a href="#6907133cceb8c785482dac4a3125dbff95a3d8e2">
src/input-files.h
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src/makefile.version
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src/mergeVCF.c
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src/propmapped.c
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src/qualityScores.c
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src/read-repair.c
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The diff was not included because it is too large.
</h5>
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