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<h3 style="margin-top: 20px; margin-bottom: 10px;">
Michael R. Crusoe pushed to branch upstream at <a href="https://salsa.debian.org/med-team/toil">Debian Med / toil</a>
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Commits:
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<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/toil/-/commit/a3905459ae05bef1667d4da8394fe466607cf554">a3905459</a></strong>
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<span> by Michael R. Crusoe </span> <i> at 2023-08-21T19:02:51+02:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 5.12.0</pre>
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<h4 style="margin-top: 10px; margin-bottom: 10px;">
30 changed files:
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<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">
.gitignore
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<a href="#587d266bb27a4dc3022bbed44dfa19849df3044c">
.gitlab-ci.yml
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.readthedocs.yaml
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<a href="#836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c">
Makefile
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<a href="#a62b8652a1f9ea532d82804117f6bbdf51425ee7">
common.mk
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<a href="#abd8589b4d5ee2ea66ee95d8caf4e8759ffb9ce0">
docs/contributing/contributing.rst
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docs/running/cliOptions.rst
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docs/running/cloud/clusterUtils.rst
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docs/running/hpcEnvironments.rst
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docs/running/server/wes.rst
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<a href="#3ddb5d0ba5a4dbf1da596fd4e9b7eafb950d778d">
docs/running/wdl.rst
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<a href="#94ef85ac03a9b3926d1726c51aaf7e720200965d">
requirements-aws.txt
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<a href="#b1f2507748c66f157346e017893778f0bef7bab0">
requirements-cwl.txt
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<a href="#f4fb69164b97e1b6f17984369c9c382573a3f919">
requirements-dev.txt
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<a href="#ba1737f2ce7d642bbfa3bdf256e038820d8cc5ca">
requirements-google.txt
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<a href="#fc2ca49802c35d519775bde7394d6a8c4024b678">
requirements-wdl.txt
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setup.cfg
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src/toil/batchSystems/singleMachine.py
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src/toil/common.py
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src/toil/cwl/__init__.py
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<a href="#0dbd18a5ef7b094b4ad2f95d5aa87ee2ed51212f">
src/toil/cwl/cwltoil.py
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<a href="#a4add364610812caa42a9215ebab384cc263e063">
src/toil/fileStores/abstractFileStore.py
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<a href="#596e3e7c16c66f62cd45824e69b58880ea4b9027">
src/toil/jobStores/abstractJobStore.py
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<a href="#dd045e3729cc148b776666a18ef81c339828c1ff">
src/toil/jobStores/googleJobStore.py
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<a href="#00bfc0233160e805130f8bc41d9a30b3f3fb8391">
src/toil/lib/accelerators.py
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src/toil/lib/aws/iam.py
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<a href="#e261735446c0c623daacadf1d3f4234a772381b7">
src/toil/lib/aws/session.py
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<a href="#b9e12697d92644b5c5066ea90567c44a73829875">
src/toil/lib/docker.py
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<a href="#daa94b7532f7f167763ab71046b4f7585b0b351d">
src/toil/server/wsgi_app.py
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<a href="#d0bde58f1db120631635b5f3fff16dd1cd6ad2a1">
src/toil/test/__init__.py
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The diff was not included because it is too large.
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