<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en" style='--code-editor-font: var(--default-mono-font, "Menlo"), DejaVu Sans Mono, Liberation Mono, Consolas, Ubuntu Mono, Courier New, andale mono, lucida console, monospace;'>
<head>
<meta content="text/html; charset=US-ASCII" http-equiv="Content-Type">
<title>
GitLab
</title>

<style data-premailer="ignore" type="text/css">
a { color: #1068bf; }
</style>


<style>img {
max-width: 100%; height: auto;
}
body {
font-size: 0.875rem;
}
body {
-webkit-text-shadow: rgba(255,255,255,0.01) 0 0 1px;
}
body {
font-family: var(--default-regular-font, -apple-system),BlinkMacSystemFont,"Segoe UI",Roboto,"Noto Sans",Ubuntu,Cantarell,"Helvetica Neue",sans-serif,"Apple Color Emoji","Segoe UI Emoji","Segoe UI Symbol","Noto Color Emoji"; font-size: inherit;
}
</style>
</head>
<body style='font-size: inherit; -webkit-text-shadow: rgba(255,255,255,0.01) 0 0 1px; font-family: var(--default-regular-font, -apple-system),BlinkMacSystemFont,"Segoe UI",Roboto,"Noto Sans",Ubuntu,Cantarell,"Helvetica Neue",sans-serif,"Apple Color Emoji","Segoe UI Emoji","Segoe UI Symbol","Noto Color Emoji";'>
<div class="content">

<h3 style="margin-top: 20px; margin-bottom: 10px;">
Michael R. Crusoe pushed to branch upstream at <a href="https://salsa.debian.org/med-team/hmmer">Debian Med / hmmer</a>
</h3>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
</h4>
<ul>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/hmmer/-/commit/b826a1e8e4de06290a1dc1595d43e5e86455bf7b">b826a1e8</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2023-08-17T18:42:36+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 3.4+dfsg</pre>
</li>
</ul>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
30 changed files:
</h4>
<ul>
<li class="file-stats">
<a href="#c335a27a082cc8d17dd36dc0eda3086cb0c9baaa">
INSTALL
</a>
</li>
<li class="file-stats">
<a href="#0398ccd0f49298b10a3d76a47800d2ebecd49859">
LICENSE
</a>
</li>
<li class="file-stats">
<a href="#4faecea6d9857941b442698cdcbd38a141ff746e">
Makefile.in
</a>
</li>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
</li>
<li class="file-stats">
<a href="#031264aec68db700e52b73d7eb56e9cd4f1a33c8">
<span class="deleted-file">

RELEASE-3.3.2.md
</span>
</a>
</li>
<li class="file-stats">
<a href="#3bd586c35d0efd899d49c18b8888f90a2e463f51">
<span class="new-file">
+
RELEASE-3.4.md
</span>
</a>
</li>
<li class="file-stats">
<a href="#99af1af9703d0cc02223461ebe0c3481d3186392">
Userguide.pdf
</a>
</li>
<li class="file-stats">
<a href="#87db583be5c13c1f7b3c958b10e03d67b6a2ca06">
configure.ac
</a>
</li>
<li class="file-stats">
<a href="#658091eb937ffdd912e207ec645eeacc4d52cf66">
documentation/man/Makefile.in
</a>
</li>
<li class="file-stats">
<a href="#41d73d01ca47201e1a346a65fcbd039d4073fe0f">
documentation/man/alimask.man.in
</a>
</li>
<li class="file-stats">
<a href="#511065bf76ba683c03625672ae5c85b6006878f2">
documentation/man/hmmbuild.man.in
</a>
</li>
<li class="file-stats">
<a href="#894a8a80cb60bd49e2ad4727d87c0e1f4658cb67">
documentation/man/hmmfetch.man.in
</a>
</li>
<li class="file-stats">
<a href="#8ff1b7b7fc4ed75f659a521fdcbac76079444aa6">
documentation/man/hmmscan.man.in
</a>
</li>
<li class="file-stats">
<a href="#eee2ad93f4c1d10d9e6056700d2d012b2e89a061">
documentation/man/jackhmmer.man.in
</a>
</li>
<li class="file-stats">
<a href="#d0350398b1abaa0ee3de34d3b759664840135ffb">
documentation/man/nhmmer.man.in
</a>
</li>
<li class="file-stats">
<a href="#dda96887b3e9da95dfcd01f89fec89cfd156b1ec">
documentation/man/nhmmscan.man.in
</a>
</li>
<li class="file-stats">
<a href="#f3f25391f8c3edd5868e4377332d8f9f01f2d004">
documentation/userguide/formats.tex
</a>
</li>
<li class="file-stats">
<a href="#70fd0aab42d1c69adc5b8e21b79cf1b7794ac045">
documentation/userguide/inclusions/gen-inclusions.py
</a>
</li>
<li class="file-stats">
<a href="#6b5cd48317f6b19a60ae49910564c1d58ce4b267">
documentation/userguide/inclusions/hmmbuild-globins.out
</a>
</li>
<li class="file-stats">
<a href="#0aca55363d6f6a028ed536fa2c533ddcdf529a95">
documentation/userguide/inclusions/hmmbuild-globins.out2
</a>
</li>
<li class="file-stats">
<a href="#006c2290038273fe03f442545ab677974a4699a8">
documentation/userguide/inclusions/hmmbuild-made1.out
</a>
</li>
<li class="file-stats">
<a href="#99a8ccc75c775fd16c95de868dc0c60a7ef265ea">
documentation/userguide/inclusions/hmmscan-minifam-sevenless.out
</a>
</li>
<li class="file-stats">
<a href="#c3a7e3390ce6b85f3c54ba1e0e4656f68fb672eb">
documentation/userguide/inclusions/hmmscan-noargs.out
</a>
</li>
<li class="file-stats">
<a href="#a826ac79a5feca9d91dd390f5ab4a9c8b9777b67">
documentation/userguide/inclusions/hmmsearch-fn3-uniprot.out
</a>
</li>
<li class="file-stats">
<a href="#3133d370ccf765f626b9f3489fbe5122c917f5ae">
documentation/userguide/inclusions/hmmsearch-globins.out
</a>
</li>
<li class="file-stats">
<a href="#f826554e3bf701297689680064e02efd386ab9c1">
documentation/userguide/inclusions/hmmsearch-globins.out2
</a>
</li>
<li class="file-stats">
<a href="#956d16273ede8e8ef1d05da13c88ee1368d51b97">
documentation/userguide/inclusions/hmmsearch-globins.out3
</a>
</li>
<li class="file-stats">
<a href="#4f2a8221f5f3dd6d962c1bbe9f8da83331a1cf6d">
documentation/userguide/inclusions/hmmstat-minifam.out
</a>
</li>
<li class="file-stats">
<a href="#ae344fbcc61ddd506bcc291595bcc7f5bd49ed48">
documentation/userguide/inclusions/inclusions.def
</a>
</li>
<li class="file-stats">
<a href="#b5b8bd0ae96ed7167f66d815ad1bdc0a0b8c26b1">
documentation/userguide/inclusions/jackhmmer-hbb-uniprot.out
</a>
</li>
</ul>
<h5 style="margin-top: 10px; margin-bottom: 10px; font-size: 0.875rem;">
The diff was not included because it is too large.
</h5>

</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #737278;">

<br>
<a href="https://salsa.debian.org/med-team/hmmer/-/commit/b826a1e8e4de06290a1dc1595d43e5e86455bf7b">View it on GitLab</a>.
<br>
You're receiving this email because of your account on <a target="_blank" rel="noopener noreferrer" href="https://salsa.debian.org">salsa.debian.org</a>. <a href="https://salsa.debian.org/-/profile/notifications" target="_blank" rel="noopener noreferrer" class="mng-notif-link">Manage all notifications</a> · <a href="https://salsa.debian.org/help" target="_blank" rel="noopener noreferrer" class="help-link">Help</a>
<script type="application/ld+json">{"@context":"http://schema.org","@type":"EmailMessage","action":{"@type":"ViewAction","name":"View Commit","url":"https://salsa.debian.org/med-team/hmmer/-/commit/b826a1e8e4de06290a1dc1595d43e5e86455bf7b"}}</script>


</p>
</div>
</body>
</html>