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<div class="content">
<h3 style="margin-top: 20px; margin-bottom: 10px;">
Michael R. Crusoe pushed to branch master at <a href="https://salsa.debian.org/med-team/hmmer">Debian Med / hmmer</a>
</h3>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
</h4>
<ul>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/hmmer/-/commit/6e81ec76a9c2f46a009ef35dffddae6723f3d3a7">6e81ec76</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2023-08-17T18:42:34+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>routine-update: New upstream version
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/hmmer/-/commit/b826a1e8e4de06290a1dc1595d43e5e86455bf7b">b826a1e8</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2023-08-17T18:42:36+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 3.4+dfsg</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/hmmer/-/commit/933bc79e71f88f52d29e6f0c9b015d6f21556634">933bc79e</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2023-08-17T18:42:55+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Update upstream source from tag 'upstream/3.4+dfsg'
Update to upstream version '3.4+dfsg'
with Debian dir 9e9db191ba25f78d81460397d56a72a23f21706e</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/hmmer/-/commit/5d7f1d5f98642e39e9c2cabf5a3d44aad769c6c3">5d7f1d5f</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2023-08-17T18:42:55+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>routine-update: Standards-Version: 4.6.2
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/hmmer/-/commit/f1b6e4c21dd16758ec3f26f5fdc6f7f175e03b12">f1b6e4c2</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2023-08-17T18:43:21+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Set upstream metadata fields: Bug-Submit.
Changes-By: lintian-brush
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/hmmer/-/commit/c239e39680edd550236053bf2e8db847e3edc0e5">c239e396</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2023-08-17T18:43:30+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Apply multi-arch hints.
+ hmmer-examples: Add Multi-Arch: foreign.
Changes-By: apply-multiarch-hints
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/hmmer/-/commit/5cd4e453726c563782e641eee8a05c62def003a8">5cd4e453</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2023-09-14T18:31:01+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>refresh patches
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/hmmer/-/commit/4be8b7d3fb15cbd666b10420a67f904ab9589689">4be8b7d3</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2023-09-14T18:31:01+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>d/control: enable building on arm64.
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/hmmer/-/commit/b701602b3a81e38e81c16e7a510ce28b9407875e">b701602b</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2023-09-14T18:31:02+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>d/tests/control: tests needs python3
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/hmmer/-/commit/4cfcdbd3b10a5d2a3345d32d01576cc56f4d9017">4cfcdbd3</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2023-09-14T18:33:29+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>routine-update: Ready to upload to unstable
</pre>
</li>
</ul>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
30 changed files:
</h4>
<ul>
<li class="file-stats">
<a href="#c335a27a082cc8d17dd36dc0eda3086cb0c9baaa">
INSTALL
</a>
</li>
<li class="file-stats">
<a href="#0398ccd0f49298b10a3d76a47800d2ebecd49859">
LICENSE
</a>
</li>
<li class="file-stats">
<a href="#4faecea6d9857941b442698cdcbd38a141ff746e">
Makefile.in
</a>
</li>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
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<li class="file-stats">
<a href="#031264aec68db700e52b73d7eb56e9cd4f1a33c8">
<span class="deleted-file">
−
RELEASE-3.3.2.md
</span>
</a>
</li>
<li class="file-stats">
<a href="#3bd586c35d0efd899d49c18b8888f90a2e463f51">
<span class="new-file">
+
RELEASE-3.4.md
</span>
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<li class="file-stats">
<a href="#99af1af9703d0cc02223461ebe0c3481d3186392">
Userguide.pdf
</a>
</li>
<li class="file-stats">
<a href="#87db583be5c13c1f7b3c958b10e03d67b6a2ca06">
configure.ac
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<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<li class="file-stats">
<a href="#d6c09299b1f914372840e8fd6fcc850f8a11b236">
debian/patches/hardening
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<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
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<li class="file-stats">
<a href="#e4c19aed51618bf0c7ebd03189c67e422f84d4eb">
debian/patches/spelling
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<li class="file-stats">
<a href="#b15a99ee5ccea35de40299415a1012352a012470">
debian/patches/sub_make_parallel
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<li class="file-stats">
<a href="#3f47f59e053feb9db0d43cb485852c4b820300b3">
debian/patches/use_debian_packaged_libdivsufsort.patch
</a>
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<li class="file-stats">
<a href="#88ad3f12692e761b0a4a428bd5debc44b050bb9d">
debian/patches/verbose-easel
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<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
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<li class="file-stats">
<a href="#83223a554d33ba7e1888274ff8ac43adb8147ba0">
debian/tests/control
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<li class="file-stats">
<a href="#f5606a935d95a2f20059a7ac1136f47b2edadbf6">
debian/upstream/metadata
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<li class="file-stats">
<a href="#658091eb937ffdd912e207ec645eeacc4d52cf66">
documentation/man/Makefile.in
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<a href="#41d73d01ca47201e1a346a65fcbd039d4073fe0f">
documentation/man/alimask.man.in
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<li class="file-stats">
<a href="#511065bf76ba683c03625672ae5c85b6006878f2">
documentation/man/hmmbuild.man.in
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<li class="file-stats">
<a href="#894a8a80cb60bd49e2ad4727d87c0e1f4658cb67">
documentation/man/hmmfetch.man.in
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<a href="#8ff1b7b7fc4ed75f659a521fdcbac76079444aa6">
documentation/man/hmmscan.man.in
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<li class="file-stats">
<a href="#eee2ad93f4c1d10d9e6056700d2d012b2e89a061">
documentation/man/jackhmmer.man.in
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<a href="#d0350398b1abaa0ee3de34d3b759664840135ffb">
documentation/man/nhmmer.man.in
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<a href="#dda96887b3e9da95dfcd01f89fec89cfd156b1ec">
documentation/man/nhmmscan.man.in
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<a href="#f3f25391f8c3edd5868e4377332d8f9f01f2d004">
documentation/userguide/formats.tex
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<a href="#70fd0aab42d1c69adc5b8e21b79cf1b7794ac045">
documentation/userguide/inclusions/gen-inclusions.py
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<li class="file-stats">
<a href="#6b5cd48317f6b19a60ae49910564c1d58ce4b267">
documentation/userguide/inclusions/hmmbuild-globins.out
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<h5 style="margin-top: 10px; margin-bottom: 10px; font-size: 0.875rem;">
The diff was not included because it is too large.
</h5>
</div>
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