<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en" style='--code-editor-font: var(--default-mono-font, "Menlo"), DejaVu Sans Mono, Liberation Mono, Consolas, Ubuntu Mono, Courier New, andale mono, lucida console, monospace;'>
<head>
<meta content="text/html; charset=US-ASCII" http-equiv="Content-Type">
<title>
GitLab
</title>

<style data-premailer="ignore" type="text/css">
a { color: #1068bf; }
</style>


<style>img {
max-width: 100%; height: auto;
}
body {
font-size: 0.875rem;
}
body {
-webkit-text-shadow: rgba(255,255,255,0.01) 0 0 1px;
}
body {
font-family: var(--default-regular-font, -apple-system),BlinkMacSystemFont,"Segoe UI",Roboto,"Noto Sans",Ubuntu,Cantarell,"Helvetica Neue",sans-serif,"Apple Color Emoji","Segoe UI Emoji","Segoe UI Symbol","Noto Color Emoji"; font-size: inherit;
}
</style>
</head>
<body style='font-size: inherit; -webkit-text-shadow: rgba(255,255,255,0.01) 0 0 1px; font-family: var(--default-regular-font, -apple-system),BlinkMacSystemFont,"Segoe UI",Roboto,"Noto Sans",Ubuntu,Cantarell,"Helvetica Neue",sans-serif,"Apple Color Emoji","Segoe UI Emoji","Segoe UI Symbol","Noto Color Emoji";'>
<div class="content">

<h3 style="margin-top: 20px; margin-bottom: 10px;">
Michael R. Crusoe pushed to branch master at <a href="https://salsa.debian.org/med-team/infernal">Debian Med / infernal</a>
</h3>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
</h4>
<ul>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/infernal/-/commit/30fb169fc66a9917c0476fa1b03adc410637cf12">30fb169f</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2023-09-14T22:00:36+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>routine-update: New upstream version
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/infernal/-/commit/cf24ab0cbfd11530d8b510d043797a42bd8a90d1">cf24ab0c</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2023-09-14T22:00:39+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 1.1.5</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/infernal/-/commit/77e76c542bc83f4b9b73ef48059f6174989a22bb">77e76c54</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2023-09-14T22:02:16+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Update upstream source from tag 'upstream/1.1.5'

Update to upstream version '1.1.5'
with Debian dir b9f411d7e6ef92d3da15371ef67624819eda5565</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/infernal/-/commit/913769b6ac9addae821c0b0b1e5d8ef046c8ce95">913769b6</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2023-09-14T22:02:16+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>routine-update: Standards-Version: 4.6.2
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/infernal/-/commit/cff1d40cf6a1f5ad2f1234a495734a3a0dfaa2fb">cff1d40c</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2023-09-14T22:02:35+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Set field Upstream-Name in debian/copyright.

Changes-By: lintian-brush
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/infernal/-/commit/702baa48dbd92a9b43f75973c87fbb17ce7306bf">702baa48</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2023-09-14T22:02:56+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Fix typo in debian/rules rules: override_dh_compress  ⇒ override_dh_compress

Changes-By: lintian-brush
Fixes: lintian: typo-in-debhelper-override-target
See-also: https://lintian.debian.org/tags/typo-in-debhelper-override-target.html
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/infernal/-/commit/dbda364c939510e60cdbb62bed30975c002c9d0d">dbda364c</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2023-09-14T22:03:11+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Remove obsolete field Name from debian/upstream/metadata (already present in machine-readable debian/copyright).

Changes-By: lintian-brush
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/infernal/-/commit/4efdf29256a0210bd81045094ab3e515c38f959a">4efdf292</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2023-09-15T10:42:19+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>d/control: build for arm64
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/infernal/-/commit/ddfaa12c4bfe8487665894da7ed5b68c3252b045">ddfaa12c</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2023-09-15T10:42:19+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>d/upstream/metadata: link to their GitHub repo
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/infernal/-/commit/2d3e4654d7b69b757fd6847bba075b7b3fc73926">2d3e4654</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2023-09-15T10:42:20+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>d/rules: only pass -msse2 on i386
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/infernal/-/commit/c969323a9daabac400149f81876be6a17b02e11a">c969323a</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2023-09-15T10:54:21+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>d/patches: forward upstream
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/infernal/-/commit/16442a7da21d35ed31d37b535337c513a69e4237">16442a7d</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2023-09-15T10:54:21+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 0.875rem; color: #333238; position: relative; font-family: var(--default-mono-font, "Menlo"),"DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>routine-update: Ready to upload to unstable
</pre>
</li>
</ul>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
30 changed files:
</h4>
<ul>
<li class="file-stats">
<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">
.gitignore
</a>
</li>
<li class="file-stats">
<a href="#c335a27a082cc8d17dd36dc0eda3086cb0c9baaa">
INSTALL
</a>
</li>
<li class="file-stats">
<a href="#0398ccd0f49298b10a3d76a47800d2ebecd49859">
LICENSE
</a>
</li>
<li class="file-stats">
<a href="#4faecea6d9857941b442698cdcbd38a141ff746e">
Makefile.in
</a>
</li>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
</li>
<li class="file-stats">
<a href="#e3ab16ae5723f9da5d69c6001b210787f6dfaa9f">
<span class="deleted-file">

RELEASE-1.1.4.md
</span>
</a>
</li>
<li class="file-stats">
<a href="#8dd4bf5221f33052f19826ea573c39db59e6e78a">
<span class="new-file">
+
RELEASE-1.1.5.md
</span>
</a>
</li>
<li class="file-stats">
<a href="#99af1af9703d0cc02223461ebe0c3481d3186392">
Userguide.pdf
</a>
</li>
<li class="file-stats">
<a href="#09be8533ff0a6ee5d577f971145ed449399fcda4">
configure
</a>
</li>
<li class="file-stats">
<a href="#87db583be5c13c1f7b3c958b10e03d67b6a2ca06">
configure.ac
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#adb7f75f79e3bb85eb62912a2904c5d24af878fb">
debian/copyright
</a>
</li>
<li class="file-stats">
<a href="#d6c09299b1f914372840e8fd6fcc850f8a11b236">
debian/patches/hardening
</a>
</li>
<li class="file-stats">
<a href="#a8acb8f92d9ad3c7a79974b1b126f9309361c653">
debian/patches/reproducible_build.patch
</a>
</li>
<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
</a>
</li>
<li class="file-stats">
<a href="#f5606a935d95a2f20059a7ac1136f47b2edadbf6">
debian/upstream/metadata
</a>
</li>
<li class="file-stats">
<a href="#4f3e7312c5a4938edc5d765c8d3ffacffc425620">
documentation/man/cmalign.man.in
</a>
</li>
<li class="file-stats">
<a href="#1c4eb4d0ae595cbb7329f7140cac339c3f2d2702">
documentation/man/cmbuild.man.in
</a>
</li>
<li class="file-stats">
<a href="#50a6390efce508e4f8e4071c91d5a1016bffa624">
documentation/man/cmcalibrate.man.in
</a>
</li>
<li class="file-stats">
<a href="#f87b692c43948ca547991c21a577aa03184f66db">
documentation/man/cmscan.man.in
</a>
</li>
<li class="file-stats">
<a href="#65f5218b3cb327924f99e994e578da45a089e464">
documentation/man/cmsearch.man.in
</a>
</li>
<li class="file-stats">
<a href="#a0a547c7e0dda3a1948f7b9f41c301faa905bb9a">
documentation/userguide/ack.tex
</a>
</li>
<li class="file-stats">
<a href="#0b62c033bc823e5286387d86570597e6a9f65a6b">
<span class="new-file">
+
documentation/userguide/distilled.bib
</span>
</a>
</li>
<li class="file-stats">
<a href="#f3f25391f8c3edd5868e4377332d8f9f01f2d004">
documentation/userguide/formats.tex
</a>
</li>
<li class="file-stats">
<a href="#e2002437bdcfa209dc33298d221eba5c37040140">
documentation/userguide/install.tex
</a>
</li>
<li class="file-stats">
<a href="#4c03ea75aef0fc9bda2489cd86645fba6a228a3e">
documentation/userguide/introduction.tex
</a>
</li>
<li class="file-stats">
<a href="#479ecef4626c4449874fb17fbf9ab34372d9b6fc">
<span class="deleted-file">

documentation/userguide/local.bib
</span>
</a>
</li>
<li class="file-stats">
<a href="#7579827ea4595e8cc246f5f6632b5c6c6936a9d2">
documentation/userguide/main.tex
</a>
</li>
<li class="file-stats">
<a href="#7f2b6d4505b3557477fe23695a2315d2a05c342c">
<span class="deleted-file">

documentation/userguide/more.tex
</span>
</a>
</li>
</ul>
<h5 style="margin-top: 10px; margin-bottom: 10px; font-size: 0.875rem;">
The diff was not included because it is too large.
</h5>

</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #737278;">

<br>
<a href="https://salsa.debian.org/med-team/infernal/-/compare/830215df930e0caff032e4ca415de50635630525...16442a7da21d35ed31d37b535337c513a69e4237">View it on GitLab</a>.
<br>
You're receiving this email because of your account on <a target="_blank" rel="noopener noreferrer" href="https://salsa.debian.org">salsa.debian.org</a>. <a href="https://salsa.debian.org/-/profile/notifications" target="_blank" rel="noopener noreferrer" class="mng-notif-link">Manage all notifications</a> · <a href="https://salsa.debian.org/help" target="_blank" rel="noopener noreferrer" class="help-link">Help</a>



</p>
</div>
</body>
</html>