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<h3 style="margin-top: 20px; margin-bottom: 10px;">
Rebecca N. Palmer pushed to branch main at <a href="https://salsa.debian.org/med-team/snakemake">Debian Med / snakemake</a>
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<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
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<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/snakemake/-/commit/09fe7f89b4b7711f66a6887b4d05c526dce66db8">09fe7f89</a></strong>
<div>
<span> by Rebecca N. Palmer </span> <i> at 2023-07-23T11:34:28+01:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 7.30.2</pre>
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<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/snakemake/-/commit/909b7202d46ff8e9840817493090a210ab77c95c">909b7202</a></strong>
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<span> by Rebecca N. Palmer </span> <i> at 2023-11-12T12:41:41+00:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 7.32.4</pre>
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<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/snakemake/-/commit/036e8f9e7def42c2168187be965f199f34934c81">036e8f9e</a></strong>
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<span> by Rebecca N. Palmer </span> <i> at 2023-11-12T12:42:08+00:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Update upstream source from tag 'upstream/7.32.4'
Update to upstream version '7.32.4'
with Debian dir 325239c1cdd3965cbefc7ad3c860f5917b54aac1</pre>
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<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/snakemake/-/commit/3f7775930a3555ab44e05dae789ca8122eef8637">3f777593</a></strong>
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<span> by Rebecca N. Palmer </span> <i> at 2023-11-12T12:56:58+00:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Refresh patches.
</pre>
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<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/snakemake/-/commit/09508b14b49e6fbeee67afbbee1a1634181f6358">09508b14</a></strong>
<div>
<span> by Rebecca N. Palmer </span> <i> at 2023-11-12T13:05:03+00:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Drop remove-yte.patch
</pre>
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<h4 style="margin-top: 10px; margin-bottom: 10px;">
30 changed files:
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<a href="#c778226b6c4c0fb51cf7942c8ee1f3d9fc1249d0">
.github/workflows/main.yml
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<a href="#ab09011fa121d0a2bb9fa4ca76094f2482b902b7">
CHANGELOG.md
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<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#cf10603a1c12bbbc3e45d0711e954076cdb8820f">
debian/patches/0009-skip-test-without-google-cloud-sdk.patch
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<a href="#135ec01bd10e1ae371b58cf95c485e05336f96b4">
debian/patches/cirumvent-retry.patch
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<a href="#e246f69e945a7c2e9a8e25cfacfcac7714c92b69">
debian/patches/python3.patch
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<a href="#8f735a93bb087196e4fdf34f28d1de6782e8d849">
<span class="deleted-file">
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debian/patches/remove-yte.patch
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<a href="#aef4fc475d9c2698d0de9e80b3256895c791f41e">
debian/patches/remove_ccbysa_snippets.patch
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<a href="#87ba9cd7574dd1d01d72b7ceb5e99c2bc35089d1">
debian/patches/reproducible-build.patch
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<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
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<a href="#a51db43db8671eca05cb09411a68924732699541">
docs/executor_tutorial/google_lifesciences.rst
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<a href="#dfeb7b6e739ba66056c1799c63a5a39c7698b59f">
docs/snakefiles/rules.rst
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<a href="#7f695df9a93bb6d2f47c562fd1282181e830528b">
docs/tutorial/basics.rst
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<a href="#8c91c0296909b5ea3c496fde69e9dc44a6c6ae5f">
setup.cfg
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<a href="#d366205d7cd679ff6d4a61f70728e92537101763">
snakemake/__init__.py
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<a href="#5e16cbeea010f59dbef52f8950f4873c94f39c7e">
snakemake/_version.py
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<a href="#959b717a57676faf331e51a5fe763a00dea0032d">
snakemake/common/__init__.py
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<a href="#9821437dfb3fff8383b6066a2a3c7aa3f6712a32">
snakemake/dag.py
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<a href="#7610d24f21cc1508e60687b4a0c7e940a75ca358">
snakemake/executors/__init__.py
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<li class="file-stats">
<a href="#9aa6171dedb10e007e0634334a4b894498050842">
snakemake/executors/azure_batch.py
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<a href="#140e5809f76c9cb45e63d8c6c5bcc6aa65e00086">
snakemake/executors/ga4gh_tes.py
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<a href="#09eebb28d24925c2b41cf2365dd083ada597795e">
snakemake/executors/google_lifesciences.py
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<a href="#00ebfede2261c756c8d78bead3a52c38b2627e34">
snakemake/interfaces.py
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<a href="#e933119c7503fe1d48ce0b0d37492388705f5808">
snakemake/io.py
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<a href="#6c195c1be80e4ad60b55a5a06c27411c43bbc217">
snakemake/logging.py
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snakemake/modules.py
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<a href="#d70c11793454d64a7b2d77ced116226d2f13378e">
snakemake/parser.py
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<a href="#93a82c4f9627ca07fc8ef809981ab851baae987e">
snakemake/remote/AzBlob.py
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<li class="file-stats">
<a href="#0caece5b78593474cf4141623bb6db9daba0ee80">
snakemake/remote/FTP.py
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<li class="file-stats">
<a href="#f5f6dbc532c5a267b662cdf6695a36db054a325e">
snakemake/remote/SFTP.py
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<h5 style="margin-top: 10px; margin-bottom: 10px; font-size: 0.875rem;">
The diff was not included because it is too large.
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