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Andreas Tille pushed to branch master at <a href="https://salsa.debian.org/med-team/kraken2">Debian Med / kraken2</a>
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Commits:
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<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/kraken2/-/commit/c48e5583c1bd36df27c11d7d9ff85c8b2afbbf25">c48e5583</a></strong>
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<span> by Andreas Tille </span> <i> at 2023-11-28T19:55:27+01:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>routine-update: New upstream version
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</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/kraken2/-/commit/127f5e1e08060cc6707732a7624543cd3f20e1c8">127f5e1e</a></strong>
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<span> by Andreas Tille </span> <i> at 2023-11-28T19:55:28+01:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 2.1.3</pre>
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<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/kraken2/-/commit/6083f9cddbd306e521d63848b0de887cac649f37">6083f9cd</a></strong>
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<span> by Andreas Tille </span> <i> at 2023-11-28T19:55:29+01:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Update upstream source from tag 'upstream/2.1.3'
Update to upstream version '2.1.3'
with Debian dir 15d670ec9f281d316ff9b42c01664e11e5301927</pre>
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<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/kraken2/-/commit/c36e1c6f77939eac5e4befe6540527b92c4b8719">c36e1c6f</a></strong>
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<span> by Andreas Tille </span> <i> at 2023-11-28T19:55:29+01:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>routine-update: Standards-Version: 4.6.2
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/kraken2/-/commit/a13c2e9a8f9fea3cdb1e9cb284ad12bc36442d85">a13c2e9a</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-11-28T20:11:51+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Update patches
</pre>
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<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/kraken2/-/commit/b44c0cbecdcd23a927749ac71dc926f0c9b6df01">b44c0cbe</a></strong>
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<span> by Andreas Tille </span> <i> at 2023-11-28T20:13:52+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Build-Depends: zlib1g-dev
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/kraken2/-/commit/48f4e2649e1f90e56aa25312400db50fb2c0f51a">48f4e264</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-11-28T20:23:36+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Depends: python3
</pre>
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<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/kraken2/-/commit/357dc75118952c9fe3c87b425b972ff59692dd55">357dc751</a></strong>
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<span> by Andreas Tille </span> <i> at 2023-11-28T20:24:56+01:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Upload to unstable
</pre>
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<h4 style="margin-top: 10px; margin-bottom: 10px;">
24 changed files:
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.gitignore
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<a href="#ab09011fa121d0a2bb9fa4ca76094f2482b902b7">
CHANGELOG.md
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<a href="#9a2aa4db38d3115ed60da621e012c0efc0172aae">
CMakeLists.txt
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<a href="#0398ccd0f49298b10a3d76a47800d2ebecd49859">
LICENSE
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<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
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<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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debian/control
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<a href="#daec55684b92e88c6403d8faab9c4389851e6ff7">
debian/patches/hardening+debug_options.patch
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docs/MANUAL.html
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docs/Makefile
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docs/top.html
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install_kraken2.sh
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scripts/16S_gg_installation.sh
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scripts/16S_rdp_installation.sh
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scripts/16S_silva_installation.sh
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scripts/add_to_library.sh
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scripts/build_gg_taxonomy.pl
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scripts/build_kraken2_db.sh
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scripts/build_rdp_taxonomy.pl
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scripts/build_silva_taxonomy.pl
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scripts/clean_db.sh
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scripts/cp_into_tempfile.pl
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scripts/download_genomic_library.sh
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scripts/download_taxonomy.sh
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The diff was not included because it is too large.
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—
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