<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en" style='--code-editor-font: var(--default-mono-font, "GitLab Mono"), JetBrains Mono, Menlo, DejaVu Sans Mono, Liberation Mono, Consolas, Ubuntu Mono, Courier New, andale mono, lucida console, monospace;'>
<head>
<meta content="text/html; charset=US-ASCII" http-equiv="Content-Type">
<title>
GitLab
</title>

<style data-premailer="ignore" type="text/css">
a { color: #1068bf; }
</style>


<style>img {
max-width: 100%; height: auto;
}
body {
font-size: 0.875rem;
}
body {
-webkit-text-shadow: rgba(255,255,255,0.01) 0 0 1px;
}
body {
font-family: var(--default-regular-font, "GitLab Sans"),-apple-system,BlinkMacSystemFont,"Segoe UI",Roboto,"Noto Sans",Ubuntu,Cantarell,"Helvetica Neue",sans-serif,"Apple Color Emoji","Segoe UI Emoji","Segoe UI Symbol","Noto Color Emoji"; font-size: inherit;
}
</style>
</head>
<body style='font-size: inherit; -webkit-text-shadow: rgba(255,255,255,0.01) 0 0 1px; font-family: var(--default-regular-font, "GitLab Sans"),-apple-system,BlinkMacSystemFont,"Segoe UI",Roboto,"Noto Sans",Ubuntu,Cantarell,"Helvetica Neue",sans-serif,"Apple Color Emoji","Segoe UI Emoji","Segoe UI Symbol","Noto Color Emoji";'>
<div class="content">

<h3 style="margin-top: 20px; margin-bottom: 10px;">
Étienne Mollier pushed to branch upstream at <a href="https://salsa.debian.org/med-team/hyphy">Debian Med / hyphy</a>
</h3>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
</h4>
<ul>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/hyphy/-/commit/e3c4edb303511da9d0227c11e2fd76f4eaab10ce">e3c4edb3</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2023-12-15T13:22:28+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 2.5.58+dfsg</pre>
</li>
</ul>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
30 changed files:
</h4>
<ul>
<li class="file-stats">
<a href="#9a2aa4db38d3115ed60da621e012c0efc0172aae">
CMakeLists.txt
</a>
</li>
<li class="file-stats">
<a href="#9a44af93e64b38128be8393bf631d25a3a7c1204">
<span class="new-file">
+
res/TemplateBatchFiles/MSS-joint-fitter.bf
</span>
</a>
</li>
<li class="file-stats">
<a href="#4ed0809c2483f5150cdfd2c3bf07d212387406d0">
res/TemplateBatchFiles/SelectionAnalyses/BUSTED.bf
</a>
</li>
<li class="file-stats">
<a href="#cf5243a3058ebeab74574f8cd2c771cd63a43208">
res/TemplateBatchFiles/SelectionAnalyses/RELAX.bf
</a>
</li>
<li class="file-stats">
<a href="#43faaf1f56e02d91be5b281472029a32276f7b4c">
res/TemplateBatchFiles/SelectionAnalyses/aBSREL.bf
</a>
</li>
<li class="file-stats">
<a href="#8e3fdf8188fef4d3dee842226d22c54f017ec2a1">
<span class="new-file">
+
res/TemplateBatchFiles/SelectionAnalyses/error-filter.bf
</span>
</a>
</li>
<li class="file-stats">
<a href="#5162429bd3f362a69890c6b040d4be37e11a6308">
res/TemplateBatchFiles/files.lst
</a>
</li>
<li class="file-stats">
<a href="#65ee9d47988109d0925fe3692b68b7b246e7fc1d">
res/TemplateBatchFiles/libv3/IOFunctions.bf
</a>
</li>
<li class="file-stats">
<a href="#c50a9ebb34fca832759d3d11698588f8851c99cb">
res/TemplateBatchFiles/libv3/UtilityFunctions.bf
</a>
</li>
<li class="file-stats">
<a href="#5dfec713e3892a936e8b5a63db56c03bee3ec252">
res/TemplateBatchFiles/libv3/all-terms.bf
</a>
</li>
<li class="file-stats">
<a href="#3945e6db8feb0e4ed58719b69ff3d8485bc45e87">
res/TemplateBatchFiles/libv3/tasks/trees.bf
</a>
</li>
<li class="file-stats">
<a href="#565969219f94e8608a7f2d3e04e47243aa5eef59">
src/core/baseobj.cpp
</a>
</li>
<li class="file-stats">
<a href="#02cbcb76e8ce1aa3e72d55e6696cda20813d57b6">
src/core/batchlan.cpp
</a>
</li>
<li class="file-stats">
<a href="#b8a362ed8e8b5d27762dcb255aa270b7e616d311">
src/core/batchlanhelpers.cpp
</a>
</li>
<li class="file-stats">
<a href="#cbedcf5fec686e5f563504b995c5d7d07fd8c6b2">
src/core/batchlanruntime.cpp
</a>
</li>
<li class="file-stats">
<a href="#7474aa77ff4fbb7ca8b12091ad6d5e459fdc18c6">
src/core/dataset.cpp
</a>
</li>
<li class="file-stats">
<a href="#a0fe81e4f5076dffb1bf945d1fc8f2b1bef8e630">
src/core/dataset_filter.cpp
</a>
</li>
<li class="file-stats">
<a href="#59d202cc6599be3167fc3bd731039997dcaf9c72">
src/core/fstring.cpp
</a>
</li>
<li class="file-stats">
<a href="#07aceb8d215a75908cea626d9c80bc2a7c06639c">
src/core/global_things.cpp
</a>
</li>
<li class="file-stats">
<a href="#2c4d8813435a13d8730c1c223855c5b040c81a84">
src/core/hbl_env.cpp
</a>
</li>
<li class="file-stats">
<a href="#a20885eecd5215d07fdf8459ca5879bc4d13e996">
<span class="new-file">
+
src/core/hyFile.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#e21b6ac64470f896d4ceaeb549bd6c20ecb73d51">
src/core/include/baseobj.h
</a>
</li>
<li class="file-stats">
<a href="#d96642d31b69af6c250af904868c89a79c200f46">
src/core/include/dataset.h
</a>
</li>
<li class="file-stats">
<a href="#f096017b26d15cb3aebe7d7856046904f16536e5">
src/core/include/dataset_filter.h
</a>
</li>
<li class="file-stats">
<a href="#390224bdc129deb2ba2cd939305e8b820a0eee6d">
src/core/include/global_things.h
</a>
</li>
<li class="file-stats">
<a href="#962c6920ad69ee3e3b68356427f396e1e2654829">
src/core/include/hbl_env.h
</a>
</li>
<li class="file-stats">
<a href="#6c4187a1f9ff3b92feead2352c504308cdd4b993">
src/core/include/hy_strings.h
</a>
</li>
<li class="file-stats">
<a href="#6799ecc446abe3fa8eb6fec28ed4004652730fb4">
src/core/include/hy_types.h
</a>
</li>
<li class="file-stats">
<a href="#b6d9cafaaad8f36d7781acd7bbbb196eedd24ff7">
src/core/include/list.h
</a>
</li>
<li class="file-stats">
<a href="#0aac57334e127d66d9818be138193215c7262bbe">
src/core/include/matrix.h
</a>
</li>
</ul>
<h5 style="margin-top: 10px; margin-bottom: 10px; font-size: 0.875rem;">
The diff was not included because it is too large.
</h5>

</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #737278;">

<br>
<a href="https://salsa.debian.org/med-team/hyphy/-/commit/e3c4edb303511da9d0227c11e2fd76f4eaab10ce">View it on GitLab</a>.
<br>
You're receiving this email because of your account on <a target="_blank" rel="noopener noreferrer" href="https://salsa.debian.org">salsa.debian.org</a>. <a href="https://salsa.debian.org/-/profile/notifications" target="_blank" rel="noopener noreferrer" class="mng-notif-link">Manage all notifications</a> · <a href="https://salsa.debian.org/help" target="_blank" rel="noopener noreferrer" class="help-link">Help</a>
<script type="application/ld+json">{"@context":"http://schema.org","@type":"EmailMessage","action":{"@type":"ViewAction","name":"View Commit","url":"https://salsa.debian.org/med-team/hyphy/-/commit/e3c4edb303511da9d0227c11e2fd76f4eaab10ce"}}</script>


</p>
</div>
</body>
</html>