<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en" style='--code-editor-font: var(--default-mono-font, "GitLab Mono"), JetBrains Mono, Menlo, DejaVu Sans Mono, Liberation Mono, Consolas, Ubuntu Mono, Courier New, andale mono, lucida console, monospace;'>
<head>
<meta content="text/html; charset=US-ASCII" http-equiv="Content-Type">
<title>
GitLab
</title>

<style data-premailer="ignore" type="text/css">
a { color: #1068bf; }
</style>


<style>img {
max-width: 100%; height: auto;
}
body {
font-size: 0.875rem;
}
body {
-webkit-text-shadow: rgba(255,255,255,0.01) 0 0 1px;
}
body {
font-family: var(--default-regular-font, "GitLab Sans"),-apple-system,BlinkMacSystemFont,"Segoe UI",Roboto,"Noto Sans",Ubuntu,Cantarell,"Helvetica Neue",sans-serif,"Apple Color Emoji","Segoe UI Emoji","Segoe UI Symbol","Noto Color Emoji"; font-size: inherit;
}
</style>
</head>
<body style='font-size: inherit; -webkit-text-shadow: rgba(255,255,255,0.01) 0 0 1px; font-family: var(--default-regular-font, "GitLab Sans"),-apple-system,BlinkMacSystemFont,"Segoe UI",Roboto,"Noto Sans",Ubuntu,Cantarell,"Helvetica Neue",sans-serif,"Apple Color Emoji","Segoe UI Emoji","Segoe UI Symbol","Noto Color Emoji";'>
<div class="content">

<h3 style="margin-top: 20px; margin-bottom: 10px;">
Andreas Tille pushed to branch upstream at <a href="https://salsa.debian.org/med-team/python-cogent">Debian Med / python-cogent</a>
</h3>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
</h4>
<ul>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/python-cogent/-/commit/d014d5ed2ae8f22516df4d477944b01841438ba9">d014d5ed</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-12-16T22:25:29+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 2023.12.15a1+dfsg</pre>
</li>
</ul>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
30 changed files:
</h4>
<ul>
<li class="file-stats">
<a href="#a79587b1a0d089e0a18635ea925b20655a1b704a">
<span class="new-file">
+
.github/ISSUE_TEMPLATE/deprecation.md
</span>
</a>
</li>
<li class="file-stats">
<a href="#0988b61e9fba73d64ed25b036b15a88607b317a5">
<span class="new-file">
+
.github/ISSUE_TEMPLATE/discontinue.md
</span>
</a>
</li>
<li class="file-stats">
<a href="#1f385d6ca5d6c67331debf9b961808f67ca7b4fd">
<span class="new-file">
+
.github/ISSUE_TEMPLATE/docs_fix.md
</span>
</a>
</li>
<li class="file-stats">
<a href="#153e2f5c5e9d0baf23000b0c6fc54399cdda5f74">
<span class="new-file">
+
.github/ISSUE_TEMPLATE/docs_new.md
</span>
</a>
</li>
<li class="file-stats">
<a href="#37c182e857c9d9bb0eb6218a00392ab9f8e4d264">
.github/workflows/codeql.yml
</a>
</li>
<li class="file-stats">
<a href="#693f4e7b076e5a28500ecd05dfc06eb1b7b61ce1">
<span class="new-file">
+
.github/workflows/linters.yml
</span>
</a>
</li>
<li class="file-stats">
<a href="#6b9c6782d59be7c3d669b9e78328b8c384296d32">
.github/workflows/testing_develop.yml
</a>
</li>
<li class="file-stats">
<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">
.gitignore
</a>
</li>
<li class="file-stats">
<a href="#39764dc6adbe1c6e740db8636ab21a5f44f41f59">
.hgignore
</a>
</li>
<li class="file-stats">
<a href="#fc1a47a75cc8dc593b20b5e840173df634b008a1">
.hgtags
</a>
</li>
<li class="file-stats">
<a href="#f1424184a4551c33e485b3da4d54727a409deaf2">
.sourcery.yaml
</a>
</li>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
</li>
<li class="file-stats">
<a href="#ebbad1762f330f68d2c8069630940350d68ff2c3">
<span class="new-file">
+
changelog.d/README.md
</span>
</a>
</li>
<li class="file-stats">
<a href="#be4840cac131f101057964af8f355d919f8b8611">
<span class="new-file">
+
changelog.d/templates/new.md.j2
</span>
</a>
</li>
<li class="file-stats">
<a href="#88aece01c0de33a45780d8f5fd7833f6c698aef7">
<span class="new-file">
+
changelog.d/templates/new.rst.j2
</span>
</a>
</li>
<li class="file-stats">
<a href="#c1b2a55a3b859da716aa43ac6791894d8ae239f7">
<span class="new-file">
+
changelog.d/templates/title.md.j2
</span>
</a>
</li>
<li class="file-stats">
<a href="#4c23f3e77a0ef00cf8da63e8e50eef5197724f75">
changelog.md
</a>
</li>
<li class="file-stats">
<a href="#e6fb382072dde2d758b2b4fbacc466256a732cf6">
<span class="new-file">
+
doc/api/__init__/cogent3.__init__.load_annotations.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#2f5ae8542b9b0f292e7094bebdfa77f8df1bd99d">
<span class="new-file">
+
doc/api/__init__/cogent3.__init__.open_.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#88f05cd755c2ac204c3951fcf5a115585af16363">
<span class="new-file">
+
doc/api/__init__/cogent3.__init__.open_data_store.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#774607c9e1978bcf12f1ab45ea8bdb11a9801929">
<span class="new-file">
+
doc/api/annotation/annotation.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#3d9a74ba1550f2ff128ffd61ab1e1e67c89a77b8">
<span class="new-file">
+
doc/api/annotation/classes/cogent3.core.annotation.Feature.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#4d15ecb771ea85c49da2a23803bca77ea40f4e45">
<span class="new-file">
+
doc/api/annotation_db/annotation_db.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#80c6bd5ca604f88883cf8b43c087aab2c924cb0b">
<span class="new-file">
+
doc/api/annotation_db/classes/cogent3.core.annotation_db.BasicAnnotationDb.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#4c39170bbeee6117703d3882529107a60891770c">
<span class="new-file">
+
doc/api/annotation_db/classes/cogent3.core.annotation_db.GenbankAnnotationDb.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#892f8efaf4f25aec325a93b5fbe9b4af2dd37682">
<span class="new-file">
+
doc/api/annotation_db/classes/cogent3.core.annotation_db.GffAnnotationDb.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#2ec281af373c0e8f379794d9306be3c27b28ed53">
doc/api/apps/composable.define_app.rst

doc/api/app/composable/define_app.rst
</a>
</li>
<li class="file-stats">
<a href="#b2034f525713214aa40a44a00e7735b074b76290">
<span class="new-file">
+
doc/api/app/data_store/classes/cogent3.app.data_store.DataMember.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#e52066b4b631998f30cc160c7bfd790f389f69d9">
<span class="new-file">
+
doc/api/app/data_store/classes/cogent3.app.data_store.DataStoreDirectory.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#8a610d7bd3d895f0bc123bce4fd5e78522220cdd">
<span class="new-file">
+
doc/api/app/data_store/classes/cogent3.app.data_store.ReadOnlyDataStoreZipped.rst
</span>
</a>
</li>
</ul>
<h5 style="margin-top: 10px; margin-bottom: 10px; font-size: 0.875rem;">
The diff was not included because it is too large.
</h5>

</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #737278;">

<br>
<a href="https://salsa.debian.org/med-team/python-cogent/-/commit/d014d5ed2ae8f22516df4d477944b01841438ba9">View it on GitLab</a>.
<br>
You're receiving this email because of your account on <a target="_blank" rel="noopener noreferrer" href="https://salsa.debian.org">salsa.debian.org</a>. <a href="https://salsa.debian.org/-/profile/notifications" target="_blank" rel="noopener noreferrer" class="mng-notif-link">Manage all notifications</a> · <a href="https://salsa.debian.org/help" target="_blank" rel="noopener noreferrer" class="help-link">Help</a>
<script type="application/ld+json">{"@context":"http://schema.org","@type":"EmailMessage","action":{"@type":"ViewAction","name":"View Commit","url":"https://salsa.debian.org/med-team/python-cogent/-/commit/d014d5ed2ae8f22516df4d477944b01841438ba9"}}</script>


</p>
</div>
</body>
</html>