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<div class="content">
<h3 style="margin-top: 20px; margin-bottom: 10px;">
Étienne Mollier pushed to branch master at <a href="https://salsa.debian.org/med-team/hyphy">Debian Med / hyphy</a>
</h3>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
</h4>
<ul>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/hyphy/-/commit/bfa0b89943c1ed068009edd06aa6a953a9e4d8e7">bfa0b899</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2024-03-10T12:30:32+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>routine-update: New upstream version
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/hyphy/-/commit/22f23a2f7529049dd8f55d210f95f3fa4eaf1272">22f23a2f</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2024-03-10T12:30:47+01:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 2.5.60+dfsg</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/hyphy/-/commit/650e2255ea07102488dc3986fa606cbed66a4715">650e2255</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2024-03-10T12:30:55+01:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Update upstream source from tag 'upstream/2.5.60+dfsg'
Update to upstream version '2.5.60+dfsg'
with Debian dir 637e3298f86e82b465a67de9378170efd6c5b887</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/hyphy/-/commit/2d70f7a43b8043a0e3002509fe7ee6f0f7184e2c">2d70f7a4</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2024-03-10T12:32:36+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Unfuzz all patches.
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/hyphy/-/commit/c4d225560d6fc6d6a7235b5d2143e600e8d907c9">c4d22556</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2024-03-10T12:37:00+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>d/control: migrate build-dep to pkgconf.
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/hyphy/-/commit/f1e528d3386b9e930e0764f62e9d2ee7e0d9c5d9">f1e528d3</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2024-03-10T12:41:44+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>ready to upload to unstable.
</pre>
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<h4 style="margin-top: 10px; margin-bottom: 10px;">
20 changed files:
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<a href="#9a2aa4db38d3115ed60da621e012c0efc0172aae">
CMakeLists.txt
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<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<li class="file-stats">
<a href="#63c3307a25f0c1334b59e145f9fc809c05bbfa70">
debian/patches/rm_arch_specific_flags.patch
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<li class="file-stats">
<a href="#fae4045e7c53be7e233f4d504a872eab7bffa150">
debian/patches/set-zlib-after-setting-default-libs.patch
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<li class="file-stats">
<a href="#d185b62d54557160e7ddc743405a9cec66dcaa96">
debian/patches/use_debian_sqlite.patch
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<li class="file-stats">
<a href="#4ed0809c2483f5150cdfd2c3bf07d212387406d0">
res/TemplateBatchFiles/SelectionAnalyses/BUSTED.bf
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<a href="#817efc81f1180519a6136b50a447433f20cf679d">
res/TemplateBatchFiles/SelectionAnalyses/FEL.bf
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<li class="file-stats">
<a href="#428ab1297972e0944fd35b5136d40326dd840dcb">
res/TemplateBatchFiles/SelectionAnalyses/FUBAR.bf
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<a href="#cf5243a3058ebeab74574f8cd2c771cd63a43208">
res/TemplateBatchFiles/SelectionAnalyses/RELAX.bf
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<a href="#8e3fdf8188fef4d3dee842226d22c54f017ec2a1">
res/TemplateBatchFiles/SelectionAnalyses/error-filter.bf
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<li class="file-stats">
<a href="#c259485f7f96dc2ad350d5448508de915c6a9885">
res/TemplateBatchFiles/SelectionAnalyses/modules/io_functions.ibf
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<a href="#c079be28c5231888d711d5c41d1be180223dfce6">
res/TemplateBatchFiles/SelectionAnalyses/modules/shared-load-file.bf
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<a href="#5dfec713e3892a936e8b5a63db56c03bee3ec252">
res/TemplateBatchFiles/libv3/all-terms.bf
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<a href="#95a7c74b0e59bc9dc8d85b6ac4b02d308b4e09fb">
res/TemplateBatchFiles/libv3/models/codon/MG_REV.bf
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<li class="file-stats">
<a href="#0ad5f4d1790906a0091532d9ca355a6162bf3c31">
res/TemplateBatchFiles/libv3/models/model_functions.bf
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<a href="#801d4bca405dfccac3b1e451b211ca98bd00d599">
res/TemplateBatchFiles/libv3/models/parameters.bf
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<a href="#e7b72a8f9f424fe1e9e9e76f25522816189c14c9">
res/TemplateBatchFiles/libv3/tasks/alignments.bf
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<li class="file-stats">
<a href="#c7933e171033f4eac9d83419583cca5474f9266c">
res/TemplateBatchFiles/libv3/tasks/estimators.bf
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<li class="file-stats">
<a href="#59143a488074496190f2ad006f55039a2ac018cd">
res/TemplateBatchFiles/libv3/tasks/mpi.bf
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<h5 style="margin-top: 10px; margin-bottom: 10px; font-size: 0.875rem;">
The diff was not included because it is too large.
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<p style="font-size: small; color: #737278;">
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