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<h3 style="margin-top: 20px; margin-bottom: 10px;">
Michael R. Crusoe pushed to branch master at <a href="https://salsa.debian.org/med-team/python-pybedtools">Debian Med / python-pybedtools</a>
</h3>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
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<ul>
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<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/python-pybedtools/-/commit/fe2190f2237eb4b7808659449ccc2520d2fc5fd2">fe2190f2</a></strong>
<div>
<span> by Lance Lin </span> <i> at 2023-10-27T19:34:49+07:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 0.9.1</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/python-pybedtools/-/commit/0ed690ba0fd391d789765550324d20e45ca5013e">0ed690ba</a></strong>
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<span> by Michael R. Crusoe </span> <i> at 2024-05-03T17:42:50+02:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>routine-update: New upstream version
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/python-pybedtools/-/commit/462ee1df9467511a60d0a1803bfdfe5948e10f0e">462ee1df</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2024-05-03T17:42:51+02:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 0.10.0</pre>
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<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/python-pybedtools/-/commit/5334d3e9cd04b1a0ffc03bb11e76c7b25c3502e6">5334d3e9</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2024-05-03T17:42:56+02:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Update upstream source from tag 'upstream/0.10.0'
Update to upstream version '0.10.0'
with Debian dir 257865629d5d7473ee52cf47c13cfdd29eba4223</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/python-pybedtools/-/commit/33f624feba5fb6e094699908bf3cfe158af274df">33f624fe</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2024-05-03T17:52:21+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Refreshed patches.
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/python-pybedtools/-/commit/3df77d55b6779767227f6c6a0b13d587735b9f5c">3df77d55</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2024-05-03T17:52:22+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream release fixes FTBFS. Closes: #1068960
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/python-pybedtools/-/commit/871fc21f942fa33347a55dccfc17c35afbd9b465">871fc21f</a></strong>
<div>
<span> by Michael R. Crusoe </span> <i> at 2024-05-03T18:31:20+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>routine-update: Ready to upload to unstable
</pre>
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<h4 style="margin-top: 10px; margin-bottom: 10px;">
30 changed files:
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.github/workflows/main.yml
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<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<a href="#d99204060b9bc7f57de36706ed6233e85aae5a95">
debian/patches/remove_badges_from_documentation.patch
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debian/patches/spelling
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debian/patches/yaml_safe_load.patch
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docs/source/changes.rst
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docs/source/topical-bam.rst
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pybedtools/__init__.py
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pybedtools/bedtool.py
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pybedtools/cbedtools.pyx
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pybedtools/contrib/bigbed.py
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<a href="#2afba9c6c65ed3f6c34125d6be10a418fd72ec10">
pybedtools/contrib/long_range_interaction.py
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pybedtools/contrib/plotting.py
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pybedtools/contrib/venn_maker.py
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pybedtools/filenames.py
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pybedtools/helpers.py
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pybedtools/include/bedFile.h
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pybedtools/paths.py
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pybedtools/scripts/peak_pie.py
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pybedtools/scripts/venn_gchart.py
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pybedtools/test/genomepy_integration.py
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pybedtools/test/test_1.py
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pybedtools/test/test_cbedtools.py
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pybedtools/test/test_gzip_support.py
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pybedtools/test/test_helpers.py
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pybedtools/test/test_issues.py
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pybedtools/test/test_iter.py
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pybedtools/test/test_pathlib.py
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pybedtools/version.py
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requirements.txt
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The diff was not included because it is too large.
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<a href="https://salsa.debian.org/med-team/python-pybedtools/-/compare/ab8e8cc7362fb61c25a9ca363959922f8da0d3be...871fc21f942fa33347a55dccfc17c35afbd9b465">View it on GitLab</a>.
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