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<h3 style="margin-top: 20px; margin-bottom: 10px;">
Pierre Gruet pushed to branch upstream at <a href="https://salsa.debian.org/med-team/snpeff">Debian Med / snpeff</a>
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Commits:
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<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/snpeff/-/commit/4237078237a3adf6ebc45297563660676d020a86">42370782</a></strong>
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<span> by Pierre Gruet </span> <i> at 2024-05-12T21:14:28+02:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Import Upstream version 5.2.b+dfsg</pre>
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30 changed files:
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.vscode/launch.json
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config/snpEff.ENSEMBL_110.config
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config/snpEff.ENSEMBL_BFMPP_57.config
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config/snpEff.bundles.ENSEMBL_BFMPP_57.config
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config/snpEff.config
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config/snpEff.dbs.config
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config/snpEff.test.config
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docs/download/index.html
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docs/images/coverage_hitogram.png
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docs/index.html
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docs/sitemap.xml.gz
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docs/snpeff/faq/index.html
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docs/snpeff/inputoutput/index.html
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docs/snpeff/outputsummary/index.html
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docs/versions.txt
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galaxy/tool-data/snpEff_genomes.loc
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galaxy/tool-data/snpEff_genomes.loc.sample
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pcingola_cleanup.xml
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pcingola_formatter.xml
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src/bds/download/downloadEnsemblBulk.bds
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src/bds/download/downloadGenome.bds
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src/bds/download/downloadMane.bds
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src/bds/make.bds
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src/docs/download.md
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src/docs/index.md
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src/docs/snpeff/faq.md
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src/docs/snpeff/inputoutput.md
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src/docs/snpeff/outputsummary.md
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<a href="#8679d84b139e71b6747cd0be0883d7dc9c42c79a">
src/main/java/org/snpeff/SnpEff.java
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The diff was not included because it is too large.
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