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<div class="content">
<h3 style="margin-top: 20px; margin-bottom: 10px;">
Étienne Mollier pushed to branch master at <a href="https://salsa.debian.org/med-team/python-pysam">Debian Med / python-pysam</a>
</h3>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
</h4>
<ul>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/python-pysam/-/commit/c78787bab14a9327e1fb5b3200738ff74db3a267">c78787ba</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2024-05-12T14:24:32+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 0.22.1+ds</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/python-pysam/-/commit/a760522f5bc58c4681b7194f7e135d99ed0ca1ab">a760522f</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2024-05-12T14:24:37+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Update upstream source from tag 'upstream/0.22.1+ds'
Update to upstream version '0.22.1+ds'
with Debian dir 2ee2db91e5d45c01ef09c42c6e401fa04adb59ca</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/python-pysam/-/commit/f522a86cb4620af5213a880f00036295abaa270a">f522a86c</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2024-05-12T14:26:39+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>d/copyright: update copyright year.
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/python-pysam/-/commit/2fd46b80d11d94d01d0d2dc2a515289aaa2e2b01">2fd46b80</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2024-05-12T14:27:04+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>d/control: declare compliance to standards version 4.7.0.
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/python-pysam/-/commit/81efdf2a418b48c0a8567139fdcc66628f00bbc0">81efdf2a</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2024-05-12T14:30:07+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>d/python-pysam.links: delete: now irrelevant.
This file set symbolic links up to help with Python 2.7, which is
obsolete and should not be used anymore, so these links are not useful
anymore.
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/python-pysam/-/commit/26c87a44495588d921cf40cff188aa7b397dac23">26c87a44</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2024-05-12T14:31:42+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>d/control: remove dh-exec: it is not in use anymore.
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/python-pysam/-/commit/9e4a7248b9e2274662f5966d7a1454f20be9e0d8">9e4a7248</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2024-05-12T14:35:00+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>skip_test_remote.patch: unfuzz.
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/python-pysam/-/commit/c4c0289e292454c6bdab521c5153ccfbe8e5e467">c4c0289e</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2024-05-12T14:35:15+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>skip-test-on-32-bit.patch: refresh.
</pre>
</li>
<li>
<strong style="font-weight: bold;"><a href="https://salsa.debian.org/med-team/python-pysam/-/commit/97456260302d085ea6f5ae54f2b679dc41a657e7">97456260</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2024-05-12T19:40:30+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>ready to upload to unstable.
</pre>
</li>
</ul>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
30 changed files:
</h4>
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<li class="file-stats">
<a href="#c7fe42138e1c33a6d76bbf9a03822d41e03da2cc">
.cirrus.yml
</a>
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<li class="file-stats">
<a href="#9f621eb5fd3bcb2fa5c7bd228c9b1ad42edc46c8">
NEWS
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</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
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<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<li class="file-stats">
<a href="#adb7f75f79e3bb85eb62912a2904c5d24af878fb">
debian/copyright
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<li class="file-stats">
<a href="#1726a6472206e304d98c6b914431439690233fc4">
debian/patches/skip-test-on-32-bit.patch
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<a href="#82c051b99c070fc2f1f308116da2fe94cf1e6e15">
debian/patches/skip_test_remote.patch
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<a href="#f6cdd587c1136152e3d9aad4416b40dfd5316a9b">
<span class="deleted-file">
−
debian/python-pysam.links
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<li class="file-stats">
<a href="#d7272533fbd654d050d5e16548d62c357c0371b6">
<span class="new-file">
+
devtools/artifactname.py
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<a href="#4d3b134eb14b0d2a60a1a792da83691dcf079117">
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devtools/environment-dev.yaml
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<a href="#f9b92df4b59033e64a9712b0318f094363b5e904">
devtools/install-prerequisites.sh
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<a href="#df0576cbb783bc50b36e1efa3cbe0564a26c8295">
doc/conf.py
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<a href="#d07dd83feb83d5bb55347fc36d59a22459d73a17">
linker_tests/link_pre_489/cy_build.py
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<li class="file-stats">
<a href="#6e002a229ff55cbbcca08470ee3f43163cc47af4">
pysam/__init__.py
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<a href="#2942d9dbe7b9e16b19f299a67c4ddfe36bc0c325">
pysam/libcalignedsegment.pyi
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<a href="#be8fac4db0cd970b9b514c57c468ec195bfd3dbc">
pysam/libcalignmentfile.pyx
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<a href="#83d0ffc86f7fb19f872c60ff44163108c5acee60">
pysam/libcbcf.pyi
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<a href="#5cba83387c230c14bf75ecd38cfb7b96076d6897">
pysam/libctabix.pyx
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<a href="#c1995b036cb62a4cc34586e2ea08fddeb7a26361">
pysam/libctabixproxies.pyx
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<a href="#7a6843331e8511a4386f77e57cfaa7bee7c7f268">
pysam/libcutils.pyx
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<a href="#07f090ad9873f87f68699bd3cecb3e69766df008">
pysam/version.py
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<a href="#8e2edce0d507e1297474f25c00cae94258db38d8">
setup.py
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tests/AlignedSegment_test.py
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tests/AlignmentFileHeader_test.py
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tests/AlignmentFilePileup_test.py
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tests/AlignmentFile_test.py
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<a href="#5a7cf30328545689171ee4ee9ef634c0d3fbd8e3">
tests/StreamFiledescriptors_test.py
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<a href="#6df528dc63413d2128ac2d73460fcc89d9f78f0e">
tests/TestUtils.py
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<a href="#41d0bce65058c0063ec208cdcd36aa993c263cf7">
tests/VariantFile_test.py
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<a href="#906aa6d1f3d836f5da6667ed5d271833ba91cb4a">
tests/VariantRecord_test.py
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<h5 style="margin-top: 10px; margin-bottom: 10px; font-size: 0.875rem;">
The diff was not included because it is too large.
</h5>
</div>
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