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<h3 style="margin-top: 20px; margin-bottom: 10px;">
Alexandre Detiste pushed to branch master at <a href="https://salsa.debian.org/med-team/python-bx">Debian Med / python-bx</a>
</h3>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
</h4>
<ul>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/python-bx/-/commit/22624657c94b839b6169f9919732d6308141579c">22624657</a></strong>
<div>
<span> by Alexandre Detiste </span> <i> at 2024-09-22T14:10:36+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 0.13.0</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/python-bx/-/commit/89279858de8a0648a36e2f9be3aff6be60600282">89279858</a></strong>
<div>
<span> by Alexandre Detiste </span> <i> at 2024-09-22T14:10:37+02:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Update upstream source from tag 'upstream/0.13.0'

Update to upstream version '0.13.0'
with Debian dir 5e0e1403d116bea4f047c23ef0c1e1e8c75057bd</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/python-bx/-/commit/d334984243b8c8df0d77ad4548e531a1ea658c8f">d3349842</a></strong>
<div>
<span> by Alexandre Detiste </span> <i> at 2024-09-22T14:13:56+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>refresh patches
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/python-bx/-/commit/4d08179388890c6e0af656ea27f56d76537f3bec">4d081793</a></strong>
<div>
<span> by Alexandre Detiste </span> <i> at 2024-09-22T14:14:30+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>release
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/python-bx/-/commit/57da9df366c5109752cceb9f3f0cf848b6c6bdf3">57da9df3</a></strong>
<div>
<span> by Alexandre Detiste </span> <i> at 2024-09-22T14:17:34+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #333238; position: relative; font-family: var(--default-mono-font, "GitLab Mono"),"JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>add build-dep on python3-pyparsing
</pre>
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<h4 style="margin-top: 10px; margin-bottom: 10px;">
30 changed files:
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<a href="#a60e2382fd0c34cb06177a3d7034264e22531192">
.github/workflows/test.yaml
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<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<a href="#33f02537b0e088a8535be371a4dce2ea822b631e">
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debian/patches/fix_import_cookbook.patch
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debian/patches/no_psyco.patch
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debian/patches/series
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<a href="#21f07864a3929c097dd38d0ed1d1b912b1f34a64">
debian/patches/shebang.patch
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debian/patches/spelling
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<a href="#25c833be6fae47fbf91c3edb6369c23d35cd6947">
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doc/source/lib/bx.cookbook.argparse.rst
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<a href="#1bff3dbefc30d07e5669bccaef80ec13c5096b15">
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doc/source/lib/bx.cookbook.progress_bar.rst
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doc/source/lib/bx.cookbook.rst
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doc/source/lib/bx_extras.pyparsing.rst
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<a href="#f3cd9016ddbbb5b3b60b5d551646d4235c64e784">
doc/source/lib/bx_extras.rst
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<a href="#55376f529c7cb8c0604468e0d52e3a862bb8913b">
doc/source/lib/modules.rst
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doc/source/lib/psyco_full.rst
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lib/bx/__init__.py
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lib/bx/_seqmapping.pyx
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lib/bx/align/axt.py
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lib/bx/align/core.py
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lib/bx/align/lav.py
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lib/bx/align/lav_tests.py
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lib/bx/align/maf.py
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lib/bx/align/score.py
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lib/bx/align/sitemask/__init__.py
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lib/bx/align/sitemask/core.py
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lib/bx/align/sitemask/cpg.py
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lib/bx/align/tools/__init__.py
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lib/bx/bbi/bigbed_file.pyx
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lib/bx/binned_array_tests.py
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The diff was not included because it is too large.
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