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<div class="content">
<h3 style="margin-top: 20px; margin-bottom: 10px;">
Andreas Tille pushed to branch master at <a href="https://salsa.debian.org/med-team/plink2">Debian Med / plink2</a>
</h3>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
</h4>
<ul>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/plink2/-/commit/40efb62dfcb1b9d013f675eaf7d5804805c54cb4">40efb62d</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-11-29T13:04:49+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #28272d; position: relative; font-family: "GitLab Mono","JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Drop libatlas-base-dev Build-Depends, add Build-Depends alternative: liblapack-dev | liblapack.so
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/plink2/-/commit/31d949cbb3c03cd7d0db304bba41427830ac92fb">31d949cb</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-11-29T13:06:52+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #28272d; position: relative; font-family: "GitLab Mono","JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 2.00~a3.5-231123+dfsg</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/plink2/-/commit/5d363dfd4218abddf41ea3e9ed9027fd6f02b31d">5d363dfd</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-11-29T13:15:29+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #28272d; position: relative; font-family: "GitLab Mono","JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 2.00~a5.8-231123+dfsg</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/plink2/-/commit/e1c951a5115caf6573f4f79781c3a92ef18c7b4d">e1c951a5</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-11-29T13:15:33+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #28272d; position: relative; font-family: "GitLab Mono","JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Update upstream source from tag 'upstream/2.00_a5.8-231123+dfsg'
Update to upstream version '2.00~a5.8-231123+dfsg'
with Debian dir b1fcec4835d7e010733ef49ad8effe05f1b71b69</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/plink2/-/commit/1d841513bbd2421f2dabe66b5811902c0bec40e9">1d841513</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-11-29T13:16:26+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #28272d; position: relative; font-family: "GitLab Mono","JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Guess version 2.00~a5.8-231123 partly from download as well as latest Github tag
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/plink2/-/commit/9c316e86f9b231ba9670a75e256e1c650357d610">9c316e86</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-11-29T13:24:02+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #28272d; position: relative; font-family: "GitLab Mono","JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>update patches
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/plink2/-/commit/0bf17917355d25955929738b1a44a911f7ef759f">0bf17917</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-11-29T13:24:25+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #28272d; position: relative; font-family: "GitLab Mono","JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>routine-update: Standards-Version: 4.6.2
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/plink2/-/commit/a5744c8913a50f395fa8b1eadbd3f8c34be70124">a5744c89</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-11-29T13:45:02+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #28272d; position: relative; font-family: "GitLab Mono","JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>drop unneeded versioned Depends
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/plink2/-/commit/f7686844fcbd9ae16a52e5df5c0f0749a9ac61a9">f7686844</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-11-29T13:45:22+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #28272d; position: relative; font-family: "GitLab Mono","JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Do not link against libatlas and libcblas
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/plink2/-/commit/cb824780fc361a996ad13b6fdd0607716b65fdf4">cb824780</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2023-11-29T13:58:21+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #28272d; position: relative; font-family: "GitLab Mono","JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Upload to unstable
</pre>
</li>
</ul>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
23 changed files:
</h4>
<ul>
<li class="file-stats">
<a href="#836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c">
Makefile
</a>
</li>
<li class="file-stats">
<a href="#38cc88fc0f6f1d13fc1f3ba9501e086f78fd5c7b">
Makefile.src
</a>
</li>
<li class="file-stats">
<a href="#b8806a52914247c7b6ddd3557d8f6dc83c3a1844">
Python/MANIFEST.in
</a>
</li>
<li class="file-stats">
<a href="#50ad72aa8c85303949a7ebd10d7f9f93cb418022">
Python/README.md
</a>
</li>
<li class="file-stats">
<a href="#afd5cc3fdd87163d2d0699ba45104b542f60f831">
<span class="new-file">
+
Python/dev-requirements.txt
</span>
</a>
</li>
<li class="file-stats">
<a href="#ed821e12800ee8f4d589cfebbd0a2e3def2dfc71">
Python/pyproject.toml
</a>
</li>
<li class="file-stats">
<a href="#0c7900fbc4302b2845757e0514ca069c78398ce9">
Python/python_api.txt
</a>
</li>
<li class="file-stats">
<a href="#b43b93cac30179c003057d2e68a314c13d2a399b">
Python/setup.py
</a>
</li>
<li class="file-stats">
<a href="#33ccab169ef5e854db2876edeba1dc5c3c17cc56">
Python/src/pgenlib/pgenlib.pyx
</a>
</li>
<li class="file-stats">
<a href="#86053daaa9b2f224111db4a1d43709afbd40e380">
<span class="new-file">
+
Python/tests/test_pgenlib.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#c60d72248572a53d16a2f18ab6a3832e9f7181a0">
build_cuda/Makefile
</a>
</li>
<li class="file-stats">
<a href="#f00a96fdb9f82e44f644dd8d17721446f31a8c50">
build_dynamic/Makefile
</a>
</li>
<li class="file-stats">
<a href="#434ca41e410a577ed72f94f00ee82045f0d7f8b9">
build_win/Makefile
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#e550cadaf6db4389542ef0ecd277e52f0e1197d8">
debian/patches/Fix_Makefile.patch
</a>
</li>
<li class="file-stats">
<a href="#4981fe37c2def05e627148343049bbf63f279003">
<span class="deleted-file">
−
debian/patches/baseline
</span>
</a>
</li>
<li class="file-stats">
<a href="#4760acac0dfc5c609584dba296c66d74eaaf53e6">
<span class="new-file">
+
debian/patches/no_atlas.patch
</span>
</a>
</li>
<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
</a>
</li>
<li class="file-stats">
<a href="#ebfd2c3cfb38e2d9369281f7f7f48f34e374970a">
debian/patches/use_packaged_libdeflate.patch
</a>
</li>
<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
</a>
</li>
<li class="file-stats">
<a href="#68ef9f98c01c7eecd4c605cc26048a06f3304b79">
debian/watch
</a>
</li>
<li class="file-stats">
<a href="#654c8574bcfd7322f8782fba74f8ac3823658f3c">
include/SFMT.h
</a>
</li>
</ul>
<h5 style="margin-top: 10px; margin-bottom: 10px; font-size: .875rem;">
The diff was not included because it is too large.
</h5>
</div>
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