<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en" style='--code-editor-font: var(--default-mono-font, "GitLab Mono"), JetBrains Mono, Menlo, DejaVu Sans Mono, Liberation Mono, Consolas, Ubuntu Mono, Courier New, andale mono, lucida console, monospace;'>
<head>
<meta content="text/html; charset=US-ASCII" http-equiv="Content-Type">
<title>
GitLab
</title>

<style data-premailer="ignore" type="text/css">
a { color: #1068bf; }
</style>


<style>img {
max-width: 100%; height: auto;
}
body {
font-size: .875rem;
}
body {
-webkit-text-shadow: rgba(255,255,255,.01) 0 0 1px;
}
body {
font-family: "GitLab Sans",-apple-system,BlinkMacSystemFont,"Segoe UI",Roboto,"Noto Sans",Ubuntu,Cantarell,"Helvetica Neue",sans-serif,"Apple Color Emoji","Segoe UI Emoji","Segoe UI Symbol","Noto Color Emoji"; font-size: inherit;
}
</style>
</head>
<body style='font-size: inherit; -webkit-text-shadow: rgba(255,255,255,.01) 0 0 1px; font-family: "GitLab Sans",-apple-system,BlinkMacSystemFont,"Segoe UI",Roboto,"Noto Sans",Ubuntu,Cantarell,"Helvetica Neue",sans-serif,"Apple Color Emoji","Segoe UI Emoji","Segoe UI Symbol","Noto Color Emoji";'>
<div class="content">

<h3 style="margin-top: 20px; margin-bottom: 10px;">
Étienne Mollier pushed to branch master at <a href="https://salsa.debian.org/med-team/python-pysam">Debian Med / python-pysam</a>
</h3>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
</h4>
<ul>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/python-pysam/-/commit/41e92da4859bab52dc2a124d0b8779d8f24ba9fe">41e92da4</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2025-02-05T20:59:57+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono","JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>d/copyright: account for uscan warning about missing files.
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/python-pysam/-/commit/f09de47a85e55f8a6e872feae2ac3f3b7d59e2a2">f09de47a</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2025-02-05T21:00:32+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono","JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 0.23.0+ds</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/python-pysam/-/commit/9a745d0728338a03743da5feed4bb505c532e52e">9a745d07</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2025-02-05T21:00:37+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono","JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Update upstream source from tag 'upstream/0.23.0+ds'

Update to upstream version '0.23.0+ds'
with Debian dir d6b5c17d14ac35a0c7a5d7e9ab39e151ef46370e</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/python-pysam/-/commit/e306f630751682425ff1ed5dc532b3d6bb299773">e306f630</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2025-02-05T21:16:27+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono","JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>d/copyright: update year and freshen authors list.
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/python-pysam/-/commit/61b4c66cbe5ea8819e17b11d3c873d88be34d75e">61b4c66c</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2025-02-05T21:19:21+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono","JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>htslib-1.20.patch: delete: applied upstream.
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/python-pysam/-/commit/b89d84a7266d0e114952f6a427b94cdd2561caf3">b89d84a7</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2025-02-05T21:20:11+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono","JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>d/patches/*: refresh patches.
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/python-pysam/-/commit/1c0e01689a92279fd476a41792c7aee418bffb99">1c0e0168</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2025-02-05T21:41:23+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono","JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>d/control: pysam 0.23 depends on htslib 1.21.
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/python-pysam/-/commit/705bea6c7ec240c5b6758c87283ada827511605a">705bea6c</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2025-02-05T21:41:59+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono","JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>d/patches/*: normalize Last-Update timestamp.
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/python-pysam/-/commit/62b93705c4208f1921445f5e1660d2a7fea032e2">62b93705</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2025-02-05T22:12:53+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono","JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>d/changelog: ready for experimental upload.
</pre>
</li>
</ul>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
14 changed files:
</h4>
<ul>
<li class="file-stats">
<a href="#c7fe42138e1c33a6d76bbf9a03822d41e03da2cc">
.cirrus.yml
</a>
</li>
<li class="file-stats">
<a href="#dad57a4c245a8007c90257aef0514c8b6a0f600c">
AUTHORS
</a>
</li>
<li class="file-stats">
<a href="#c335a27a082cc8d17dd36dc0eda3086cb0c9baaa">
INSTALL
</a>
</li>
<li class="file-stats">
<a href="#8875df48c18030126ef5ef5a6f5c93b23451fb9f">
MANIFEST.in
</a>
</li>
<li class="file-stats">
<a href="#9f621eb5fd3bcb2fa5c7bd228c9b1ad42edc46c8">
NEWS
</a>
</li>
<li class="file-stats">
<a href="#561b88e19de321ca62c7590bbb350765fb110905">
README.rst
</a>
</li>
<li class="file-stats">
<a href="#7335b92e55fb2b16453944f568cbe22c68faa32e">
bcftools/HMM.h
</a>
</li>
<li class="file-stats">
<a href="#adbc13e7f34c9a3ba1484d17e5f19d25d4b9d14c">
bcftools/LICENSE
</a>
</li>
<li class="file-stats">
<a href="#bf0a43679ba9de44db63c21cfaaab4c13b046460">
bcftools/abuf.c
</a>
</li>
<li class="file-stats">
<a href="#4a681d360c0cdcc37cf928592e704ba449b47a46">
bcftools/abuf.c.pysam.c
</a>
</li>
<li class="file-stats">
<a href="#38f2fca9b910b46be301187a68db080cc6770e67">
bcftools/bam2bcf.c
</a>
</li>
<li class="file-stats">
<a href="#74d5e4573ce694cb34f610ad7397afdc133ab7d6">
bcftools/bam2bcf.c.pysam.c
</a>
</li>
<li class="file-stats">
<a href="#03d75ee5d78a5bfabdc772145285f786dad2524c">
bcftools/bam2bcf.h
</a>
</li>
<li class="file-stats">
<a href="#3b3540430208b1193982ade3fdcc07ae342ac386">
<span class="new-file">
+
bcftools/bam2bcf_edlib.c
</span>
</a>
</li>
</ul>
<h5 style="margin-top: 10px; margin-bottom: 10px; font-size: .875rem;">
The diff was not included because it is too large.
</h5>

</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #737278;">

<br>
<a href="https://salsa.debian.org/med-team/python-pysam/-/compare/a0548822fe326d405407d653cdf9ff19a362a28f...62b93705c4208f1921445f5e1660d2a7fea032e2">View it on GitLab</a>.
<br>
You're receiving this email because of your account on <a target="_blank" rel="noopener noreferrer" href="https://salsa.debian.org">salsa.debian.org</a>. <a href="https://salsa.debian.org/-/profile/notifications" target="_blank" rel="noopener noreferrer" class="mng-notif-link">Manage all notifications</a> · <a href="https://salsa.debian.org/help" target="_blank" rel="noopener noreferrer" class="help-link">Help</a>



</p>
</div>
</body>
</html>