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<h3 style="margin-top: 20px; margin-bottom: 10px;">
Andreas Tille pushed to branch upstream at <a href="https://salsa.debian.org/med-team/python-cogent">Debian Med / python-cogent</a>
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Commits:
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<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/python-cogent/-/commit/db5d49b73af97cf423c39c17a075822c78ea4ca3">db5d49b7</a></strong>
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<span> by Andreas Tille </span> <i> at 2025-02-15T15:04:42+01:00 </i>
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<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono","JetBrains Mono","Menlo","DejaVu Sans Mono","Liberation Mono","Consolas","Ubuntu Mono","Courier New","andale mono","lucida console",monospace; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 2024.12.19a2+dfsg</pre>
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30 changed files:
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.github/workflows/linters.yml
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.github/workflows/release.yml
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README.md
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changelog.md
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doc/conf.py
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doc/cookbook/annotation_db.rst
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doc/cookbook/features.rst
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doc/doctest_rsts.py
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doc/examples/demo-mpi-parallel.py
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doc/examples/parallel.rst
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doc/install.rst
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doc/rst2script.py
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noxfile.py
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pyproject.toml
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requirements.txt
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src/cogent3/__init__.py
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src/cogent3/_version.py
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src/cogent3/align/align.py
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src/cogent3/align/dp_calculation.py
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src/cogent3/align/indel_model.py
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src/cogent3/align/indel_positions.py
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src/cogent3/align/pairwise.py
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src/cogent3/align/pairwise_pogs_numba.py
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src/cogent3/align/pairwise_seqs_numba.py
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src/cogent3/align/progressive.py
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src/cogent3/align/pycompare.py
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src/cogent3/align/traceback.py
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src/cogent3/app/__init__.py
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src/cogent3/app/align.py
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