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<div class="content">
<h3 style="margin-top: 20px; margin-bottom: 10px;">
Étienne Mollier pushed to branch master at <a href="https://salsa.debian.org/med-team/libslow5lib">Debian Med / libslow5lib</a>
</h3>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
</h4>
<ul>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/libslow5lib/-/commit/f1f60f4f76420ef7cce18fd9365cf526d0fba3b2">f1f60f4f</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2025-11-05T19:49:06+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 1.3.1+dfsg</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/libslow5lib/-/commit/85fdd0578413ca8439610db933ea1efe041f602e">85fdd057</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2025-11-05T19:49:11+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Update upstream source from tag 'upstream/1.3.1+dfsg'
Update to upstream version '1.3.1+dfsg'
with Debian dir fb2ee6146e5d306efa35b57b2db6947512f62eac</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/libslow5lib/-/commit/62f445a11a6146dffecc7432092d231f24bbdb72">62f445a1</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2025-11-05T19:54:39+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>use_debian_packaged_streamvbyte.patch: refresh.
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/libslow5lib/-/commit/be53835ffab4410910311b0f26d1945434fb977e">be53835f</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2025-11-05T19:59:27+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>enable_shared_and_static.patch: refresh.
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/libslow5lib/-/commit/5963dd2be57fbd4ba8f65f519d1b52b896035bd3">5963dd2b</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2025-11-05T20:02:31+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>fix-baseline.patch: refresh.
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/libslow5lib/-/commit/a1fae6956f1c82e430272fa07eea75753c96b41d">a1fae695</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2025-11-05T20:10:16+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>use_debian_packaged_streamvbyte.patch: complement.
There were a few __slow5_streamvbyte calls to convert to plain
streamvbyte.
Gbp-Dch: ignore
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/libslow5lib/-/commit/c386a570fc9a71854b6a4ad4a1d89ec01a0bd71c">c386a570</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2025-11-05T20:14:10+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>d/libslow5-0t64.symbols: append new symbols.
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/libslow5lib/-/commit/3728bf78714f3e22b38ad66e8c5229c068ff54a3">3728bf78</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2025-11-05T20:51:07+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>d/control: declare compliance to standards version 4.7.2.
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/libslow5lib/-/commit/098a6b858054cd0d9b123b807662465d693758e5">098a6b85</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2025-11-05T20:51:31+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>d/control: drop redundant Rules-Requires-Root: no.
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/libslow5lib/-/commit/7f5b468caeff82c7547d2f6c2a46997a7d3075f3">7f5b468c</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2025-11-05T20:54:45+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>d/control: build depends on python3-numpy-dev.
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/libslow5lib/-/commit/67e42cf493960a8d7300f20a1e92cb5dca0f833b">67e42cf4</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2025-11-05T21:37:02+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>use_debian_packaged_streamvbyte.patch: last adjustment.
This change was needed in order to fix a heap corruption detected on
free(2) invocation and crashing the autopkgtest with:
free(): corrupted unsorted chunks
It is worth noting that upstream stores debug techniques based on the
address sanitizer in the file python/pydebug.sh. Taking inspiration
on this script to invoke the address sanitizer was invaluable to
determine what the issue was exactly.
This change is part of the patch refresh to align with the new
upstream version.
Gbp-Dch: ignore
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/libslow5lib/-/commit/5dc2da85b2d5a581cf0a6d896d6d211bc0151ca3">5dc2da85</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2025-11-05T21:37:27+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>d/rules: install all examples.
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/libslow5lib/-/commit/42b21ef5645817384c0fcb16dd0301079af6cf00">42b21ef5</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2025-11-05T21:50:33+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>d/clean: cleanup extra files.
Closes: #1048497
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/libslow5lib/-/commit/d4e8b436cc48401d618c0abd8b097ea5c66fa7ea">d4e8b436</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2025-11-05T21:58:33+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>d/rules: protect include/ directory from mishaps.
Closes: #1049769
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/libslow5lib/-/commit/f6c6f45c6d2caee97e8612db9553b6f8be920d23">f6c6f45c</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2025-11-05T22:09:03+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>unshuffle-makefile.patch: new: fix make --reverse.
Closes: #1105533
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/libslow5lib/-/commit/a844fab76b1aca0947fd1e0394ed0986881df7aa">a844fab7</a></strong>
<div>
<span> by Étienne Mollier </span> <i> at 2025-11-05T22:11:31+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>d/changelog: initialise the changelog.
</pre>
</li>
</ul>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
73 changed files:
</h4>
<ul>
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<a href="#dea01dd89a3b602828e630677fde5d77c06441c8">
.travis.yml
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<a href="#9a2aa4db38d3115ed60da621e012c0efc0172aae">
CMakeLists.txt
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<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
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debian/changelog
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