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<div class="content">

<h3 style="margin-top: 20px; margin-bottom: 10px;">

Pierre Gruet pushed to branch master at <a href="https://salsa.debian.org/med-team/htsjdk">Debian Med / htsjdk</a>

</h3>

<h4 style="margin-top: 10px; margin-bottom: 10px;">

Commits:

</h4>

<ul>

<li>

<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/htsjdk/-/commit/affa340a06d1405e5da3133065f53f8cc093f849">affa340a</a></strong>

<div>

<span> by Pierre Gruet </span> <i> at 2026-05-29T07:30:57+02:00 </i>

</div>

<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Raising Standards version to 4.7.4

</pre>

</li>

<li>

<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/htsjdk/-/commit/339a86863b89a529e0343d4eb812d3646df73aa1">339a8686</a></strong>

<div>

<span> by Pierre Gruet </span> <i> at 2026-05-29T07:31:53+02:00 </i>

</div>

<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 5.0.0+dfsg</pre>

</li>

<li>

<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/htsjdk/-/commit/7d591e24415bb907d2839db62bd869e7e27bca56">7d591e24</a></strong>

<div>

<span> by Pierre Gruet </span> <i> at 2026-05-29T07:32:04+02:00 </i>

</div>

<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Update upstream source from tag 'upstream/5.0.0+dfsg'

Update to upstream version '5.0.0+dfsg'

with Debian dir 275b138b6638112858bf4bfdc7699e812cca8582</pre>

</li>

<li>

<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/htsjdk/-/commit/6faa1500f6193b63cfd0be64547885ee87898210">6faa1500</a></strong>

<div>

<span> by Pierre Gruet </span> <i> at 2026-05-29T13:14:28+02:00 </i>

</div>

<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Updating d/copyright

</pre>

</li>

<li>

<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/htsjdk/-/commit/a7cfbeed940cb68c90f75bbbfdc65234ac5ede75">a7cfbeed</a></strong>

<div>

<span> by Pierre Gruet </span> <i> at 2026-05-29T13:15:17+02:00 </i>

</div>

<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Removing obsolete skip-non-installable restrictions in d/t/control

</pre>

</li>

<li>

<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/htsjdk/-/commit/a49f2ceba190deb8c7d8c85e13135765d3f91501">a49f2ceb</a></strong>

<div>

<span> by Pierre Gruet </span> <i> at 2026-05-29T13:17:49+02:00 </i>

</div>

<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Refreshing patches

</pre>

</li>

<li>

<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/htsjdk/-/commit/f31b791f6ad48ec0d17acee5ed90c1f7d9145deb">f31b791f</a></strong>

<div>

<span> by Pierre Gruet </span> <i> at 2026-05-29T13:35:59+02:00 </i>

</div>

<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Using the standard inflater/deflater

</pre>

</li>

<li>

<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/htsjdk/-/commit/044ee0a8c181e5b6bdcefc92055bbed7ad6909f8">044ee0a8</a></strong>

<div>

<span> by Pierre Gruet </span> <i> at 2026-05-29T13:36:15+02:00 </i>

</div>

<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Deactivating a test requiring too much memory

</pre>

</li>

<li>

<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/htsjdk/-/commit/5e1dadea2c2904cfcdebb1af65ad13a7de500e04">5e1dadea</a></strong>

<div>

<span> by Pierre Gruet </span> <i> at 2026-05-29T13:36:43+02:00 </i>

</div>

<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Ignoring dependency on libdeflate

</pre>

</li>

<li>

<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/htsjdk/-/commit/90ac01e836a83ad4dc1523690860da8a3d318332">90ac01e8</a></strong>

<div>

<span> by Pierre Gruet </span> <i> at 2026-05-29T13:36:53+02:00 </i>

</div>

<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Updating changelog

</pre>

</li>

<li>

<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/htsjdk/-/commit/3bf1c1609f8bf38b2e44d7c7bdae8eb765939cbc">3bf1c160</a></strong>

<div>

<span> by Pierre Gruet </span> <i> at 2026-05-29T13:37:04+02:00 </i>

</div>

<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Upload to unstable

</pre>

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