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<div class="content">
<h3 style="margin-top: 20px; margin-bottom: 10px;">
Andreas Tille pushed to branch master at <a href="https://salsa.debian.org/med-team/python-gffutils">Debian Med / python-gffutils</a>
</h3>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
Commits:
</h4>
<ul>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/python-gffutils/-/commit/4401eb6f6bdc1f8c3160d7fb8779ae5fc225eeef">4401eb6f</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2026-08-13T16:34:10+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Make the build reproducible Closes: #1120066
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/python-gffutils/-/commit/596c9558fbc37ee0b46037477b3ced1740b37097">596c9558</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2026-08-13T16:34:54+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version 0.14</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/python-gffutils/-/commit/85ec4b9e29d58f6730b40caf4d4228c7a2ac10fe">85ec4b9e</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2026-08-13T16:34:54+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>New upstream version
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/python-gffutils/-/commit/ee39be4589d5ac25dbf3e1f9c6e3db013812340a">ee39be45</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2026-08-13T16:34:57+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Update upstream source from tag 'upstream/0.14'
Update to upstream version '0.14'
with Debian dir baba9cd10cd41efe035beabd111506dbcd6d7807</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/python-gffutils/-/commit/aa50d762c5fadc283d035f7c062d49df7a5a1773">aa50d762</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2026-08-13T16:37:29+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Changes made by cme
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/python-gffutils/-/commit/33f47ba74cbeb929ddcf142ef7b37dde500e287f">33f47ba7</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2026-08-13T16:37:31+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Remove trailing whitespace in debian/changelog (routine-update)
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/python-gffutils/-/commit/6207cf8bdb27d5b34570d73919c7a32623c85ca3">6207cf8b</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2026-08-13T16:38:05+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Build-Depends: pybuild-plugin-pyproject (routine-update)
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/python-gffutils/-/commit/d27326d38e091d83dc585aef07e6995abff86d8e">d27326d3</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2026-08-13T15:38:08+01:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Set upstream metadata fields: Repository-Browse.
Changes-By: lintian-brush
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/python-gffutils/-/commit/c971fe7b96efa3a65b23ada5bc4dfdf24f27212a">c971fe7b</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2026-08-13T16:38:10+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>debputy lint --auto-fix (routine-update)
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/python-gffutils/-/commit/e672793e60b6c10ec854fd351689775f362dee6a">e672793e</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2026-08-13T16:47:35+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Refresh / deactivate patches
</pre>
</li>
<li>
<strong style="font-weight: 600;"><a href="https://salsa.debian.org/med-team/python-gffutils/-/commit/da8aa148291ced9e989855f3ce8efffc738e6e20">da8aa148</a></strong>
<div>
<span> by Andreas Tille </span> <i> at 2026-08-13T16:49:27+02:00 </i>
</div>
<pre class="commit-message" style='white-space: pre-wrap; display: block; font-size: 14px; color: #3a383f; position: relative; font-family: "GitLab Mono", "JetBrains Mono", "Menlo", "DejaVu Sans Mono", "Liberation Mono", "Consolas", "Ubuntu Mono", "Courier New", "andale mono", "lucida console", monospace; font-variant-ligatures: none; word-break: break-all; word-wrap: break-word; background-color: #fbfafd; border-radius: 2px; margin: 0; padding: 8px 12px; border: 1px solid #dcdcde;'>Upload to unstable
</pre>
</li>
</ul>
<h4 style="margin-top: 10px; margin-bottom: 10px;">
36 changed files:
</h4>
<ul>
<li class="file-stats">
<a href="#8875df48c18030126ef5ef5a6f5c93b23451fb9f">
MANIFEST.in
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<li class="file-stats">
<a href="#7d26833a43d8865f6d9679068f6f9ee7d6e13dcf">
PKG-INFO
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<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<a href="#24db58f32113a1c74a8f028e1dc2f4cea1a9de16">
debian/patches/pr235.patch
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<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
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<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
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<a href="#f5606a935d95a2f20059a7ac1136f47b2edadbf6">
debian/upstream/metadata
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<a href="#68ef9f98c01c7eecd4c605cc26048a06f3304b79">
debian/watch
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<a href="#3d943d266a6d2a89bb93c222b35a94116d50ad8f">
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doc/source/_templates/class.rst
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<li class="file-stats">
<a href="#382bcb8cd1496c8d0d592bdeaaaa156299aed898">
gffutils.egg-info/PKG-INFO
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<li class="file-stats">
<a href="#d3589e08517ba1ffed9a60087862e0a3374d8f12">
gffutils.egg-info/SOURCES.txt
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<a href="#f150cef205dd7bcb93d9a71c4b130f69cc21b933">
gffutils.egg-info/requires.txt
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<a href="#e8a287a8c75ae5732329d6f6adb9e39d4c28ee94">
gffutils/__init__.py
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<a href="#402ca719cc46f9f4be84c5f71f1b1facdfa27065">
gffutils/constants.py
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<a href="#919a41ac5680f6a85ce5330fa5eeafc3beedb017">
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gffutils/contrib/__init__.py
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gffutils/contrib/plotting.py
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<a href="#0fcebaeb967483b2aefccc38ee7038aeb57ed6b6">
gffutils/create.py
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<a href="#82bd271c739c9bc8738fd7c0b57257d6db9d00a2">
gffutils/feature.py
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<a href="#21be6eff3544031a8176bbb5629c1728ced6da74">
gffutils/gffwriter.py
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<a href="#04cef6b8c6f04a6fd3441ac29249595f331a082f">
gffutils/helpers.py
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<a href="#fddb19e520264cff8743df915666b073884bef60">
gffutils/interface.py
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<a href="#4596c28d6a9f80cdb433781b12bc2aafe91349e1">
gffutils/iterators.py
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<a href="#95b5bb48b2a3ee493756e3ff8ac8f419724555fd">
gffutils/parser.py
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<a href="#813e78223f55b4ca02a5f4aee6a78b722bd609a2">
gffutils/pybedtools_integration.py
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gffutils/scripts/gffutils-cli
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gffutils/test/attr_test_cases.py
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<a href="#0411db144b0a8b880fc95151fc5e5a516f9cc6d6">
gffutils/test/data/FBgn0031208.gtf.db
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<a href="#c7e4e11f03467a7ee7206e9487ca2846b9566d8c">
gffutils/test/data/ensembl_gtf.txt
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<a href="#37e6e4e1c6bb17f0257838aa421d67edad0a0439">
gffutils/test/parser_test.py
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<a href="#8df69d4cff1a3e00d6e2d79a0d6084921cf2846e">
gffutils/test/test_1.py
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<a href="#5f2c425940451a5e93c7e86645cb918593f3a9d7">
gffutils/test/test_biopython_integration.py
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<a href="#6dc73142bada991ca30f91823e27b7a5f9942e9f">
gffutils/test/test_issues.py
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gffutils/version.py
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pyproject.toml
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setup.py
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The diff was not included because it is too large.
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